get_sep: Calculate the Separation Value for Ploidy
In yun-feng/WGDAP: Whole Genome Duplication Analysis Pipeline
Description
Usage
Arguments
Value
Examples
Description
In order to make the results more biologically meaningful, we want to set the (haplotype) ploidy to either 1 or 2,
indicating whether such sample has genome duplication or not.
This function finds the valley for the distribution of inferref ploidy from FPI, and then we could separate the ploidy based on this value (see int_ploidy).
Usage
1
Arguments
var
The current value for all variables (see init_var)
Value
Value for the separation of ploidy
Examples
1
yun-feng/WGDAP documentation built on Nov. 5, 2019, 1:22 p.m.
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Description Usage Arguments Value Examples
Description
In order to make the results more biologically meaningful, we want to set the (haplotype) ploidy to either 1 or 2,
indicating whether such sample has genome duplication or not.
This function finds the valley for the distribution of inferref ploidy from FPI, and then we could separate the ploidy based on this value (see int_ploidy).
Usage
1 |
Arguments
var |
The current value for all variables (see |
Value
Value for the separation of ploidy
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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