plot_scatter: Plot Recurrent CNV Before v.s. After WGD for each loci
In yun-feng/WGDAP: Whole Genome Duplication Analysis Pipeline
Description
Usage
Arguments
Value
Examples
Description
Plot the values for the common events happenning before v.s. after WGD for each loci, by scatterplot
ggplot2 is needed for this function
Usage
1
plot_scatter(data, var, loci = NULL)
Arguments
data
the CNV dataset (see load_data)
var
The optimal value for all variables (see Run_lasso)
loci
The particular loci to be emphasized
Value
ggplot2 graph object
Examples
1
2
library(ggplot2)
p_scatter<-plot_scatter(wkdata,Lasso_res$var,loci=c(3606,864,4858,5261,5570))
yun-feng/WGDAP documentation built on Nov. 5, 2019, 1:22 p.m.
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Description Usage Arguments Value Examples
Description
Plot the values for the common events happenning before v.s. after WGD for each loci, by scatterplot ggplot2 is needed for this function
Usage
1 | plot_scatter(data, var, loci = NULL)
|
Arguments
data |
the CNV dataset (see |
var |
The optimal value for all variables (see |
loci |
The particular loci to be emphasized |
Value
ggplot2 graph object
Examples
1 2 | library(ggplot2)
p_scatter<-plot_scatter(wkdata,Lasso_res$var,loci=c(3606,864,4858,5261,5570))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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