Man pages for ywhsiao/ceRNAR
ceRNAR: An R Package for Identification and Analysis of ceRNAs-miRNA Triplets
| all_steps_interface | A function for conducting the algorithm through the toy data |
| ceRNACustomize | A function for uploading customized data |
| ceRNAFunction | Functional enrichment analysis |
| ceRNAIntergate | Integration of the possible ceRNA pairs among published tools |
| ceRNALocation | Visualization for peak location |
| ceRNAMethod | Main ceRNAR algorithm |
| ceRNAModule | Network analysis and visualization |
| ceRNApairFiltering | one of three steps in main ceRNAR algorithm |
| ceRNAputativePairs | Extraction of putative mRNA-miRNA pairs |
| ceRNASurvival | Survival analysis and visualization |
| ceRNATCGA | Retrieval of public TCGA data from GDC Xena Hub |
| ceRNAValidate | Externally experimental validation for the potential ceRNA... |
| gene_exp | Example gene expression dataset for ceRNAR |
| mirna_exp | Example mirna expression dataset for ceRNAR |
| SegmentClusteringPlusPeakMerging | two of three steps in main ceRNAR algorithm |
| surv_data | Example survival dataset for ceRNAR |
