ceRNAModule: Network analysis and visualization

In ywhsiao/ceRNAR: ceRNAR: An R Package for Identification and Analysis of ceRNAs-miRNA Triplets

Network analysis and visualization

Description

A function to analyze and visualize potential network of identified ceRNAs

Usage

ceRNAModule(
  path_prefix = NULL,
  project_name = "demo",
  disease_name = "DLBC",
  pairs_cutoff = 5,
  column_sum = 1
)

Arguments

path_prefix	user's working directory
project_name	the project name that users can assign
disease_name	the abbreviation of disease that users are interested in
pairs_cutoff	at least the number of ceRNA pairs that a mirna must have
column_sum	the number of ceRNAs

Value

a list object

Examples

ceRNAModule(
path_prefix = NULL,
project_name = 'demo',
disease_name = 'DLBC',
pairs_cutoff = 5,
column_sum = 1
)

ywhsiao/ceRNAR documentation built on Aug. 6, 2023, 3:13 p.m.