sparseSigma_JF: Jonathan Friedman's described method of computing a...
In zdk123/codmeR: COmpositional Data analysis tools for Microbial Ecology in R
Description
Jonathan Friedman's described method of computing a
correlation matrx
Usage
1
sparseSigma_JF(D, p, var = 1, center = 0)
Arguments
D
Dimension
p
probability that any otu pairs are perfectly
correlated
var
individual variance (same for all OTUs)
center
average correlation (default 0.0)
zdk123/codmeR documentation built on May 4, 2019, 10:14 p.m.
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Description
Jonathan Friedman's described method of computing a correlation matrx
Usage
1 | sparseSigma_JF(D, p, var = 1, center = 0)
|
Arguments
D |
Dimension |
p |
probability that any otu pairs are perfectly correlated |
var |
individual variance (same for all OTUs) |
center |
average correlation (default 0.0) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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