create.test.idx: Create indices for testing
In zellerlab/SIMBA: Simulation of Microbiome Data with Biological Accuracy
View source: R/create_test_idx.R
create.test.idx R Documentation
Create indices for testing
Description
This function creates a matrix of test indices for each group
in the simulation file on which differential abundance testing methods can
be run
Usage
create.test.idx(sim.location, subsets, repetitions)
Arguments
sim.location
file name for the .h5 file containing the simulations
subsets
vector of subset sizes to be sampled
repetitions
integer, number of repetitions for each group/subset
combination
Value
Returns nothing, but modifies the simulation file
zellerlab/SIMBA documentation built on June 2, 2025, 6:25 a.m.
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View source: R/create_test_idx.R
| create.test.idx | R Documentation |
Create indices for testing
Description
This function creates a matrix of test indices for each group in the simulation file on which differential abundance testing methods can be run
Usage
create.test.idx(sim.location, subsets, repetitions)
Arguments
sim.location |
file name for the .h5 file containing the simulations |
subsets |
vector of subset sizes to be sampled |
repetitions |
integer, number of repetitions for each group/subset combination |
Value
Returns nothing, but modifies the simulation file
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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