eval_data-methods: Retrieve the evaluation metrics from a SIAMCAT object

In zellerlab/siamcat: Statistical Inference of Associations between Microbial Communities And host phenoTypes

Retrieve the evaluation metrics from a SIAMCAT object

Description

Function to retrieve the evaluation metrics from a SIAMCAT object

Usage

eval_data(siamcat, verbose=1)

## S4 method for signature 'siamcat'
eval_data(siamcat, verbose = 1)

Arguments

siamcat	(Required). A siamcat-class object that contains evaluation data
verbose	integer, if the slot is empty, should a message be printed? values can be either 0 (no output) or 1 (print message)

Details

The functions returns a list containing the evaluation metrics from a SIAMCAT object. See evaluate.predictions for more information on evaluation data.

Value

The list of evaluation data or NULL

Examples

data(siamcat_example)
temp <- eval_data(siamcat_example)
names(temp)
temp$auroc

zellerlab/siamcat documentation built on Feb. 1, 2024, 2:21 a.m.