filt_params-methods: Retrieve the list of parameters for feature filtering from a...

In zellerlab/siamcat: Statistical Inference of Associations between Microbial Communities And host phenoTypes

Retrieve the list of parameters for feature filtering from a SIAMCAT object

Description

Function to retrieve the list of parameters for feature filtering

Usage

filt_params(siamcat, verbose=1)

## S4 method for signature 'siamcat'
filt_params(siamcat, verbose = 1)

Arguments

siamcat	(Required). An instance of siamcat-class containing filtered features
verbose	integer, if the slot is empty, should a message be printed? values can be either 0 (no output) or 1 (print message)

Details

The function returns the list of feature filtering parameters. See filter.features for more details.

Value

A list of feature filtering parameters or NULL

Examples

data(siamcat_example)
temp <- filt_params(siamcat_example)
names(temp)

zellerlab/siamcat documentation built on Feb. 1, 2024, 2:21 a.m.