PLNseq: A multivariate Poisson lognormal distribution for high-throughput correlated RNA-sequencing read count data

commonSigma | Common sigma |

correlationCoefficient | Correlation coefficient |

genewiseSigma | Genewise sigma |

LRtest1 | Likelihood ratio test for differential expression analysis... |

LRtest2 | Likelihood ratio test for differential expression analysis... |

lung | Lung cancer data |

PLN_ANOVA | Differential expression analysis based on a rank-reduced... |

PLNobject | PLN object |

PLNseq-package | Differential expression analysis using matched read count... |

sizeFactor | Estimate size factor for each sample. |

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