plot_etiology_music_sheet: compare the posterior distribution of population etiologies...

Description Usage Arguments Value

View source: R/plot-etiology-music-sheet.R

Description

The so-called "music-sheet plot". It takes two, or three or more output folders so that the results are combined. There must be a check to make sure that pathogens from one analysis are subset of another. DN: current implementation does not check whether the results are from the same site, or strata. This information can be seen from the folder names, or the figure names within the folders.

Usage

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plot_etiology_music_sheet(DIR_list, DIR_pathogen_displayorder_lookup,
  dir_separator = "[\\]")

Arguments

DIR_list

The list of directory paths, each storing a model output.

DIR_pathogen_displayorder_lookup

The directory path to the .csv file that stores the display order of pathogens in the combined music sheet plot.

dir_separator

The separator character for a file path.

Value

A figure that compares posterior etiology distribution stored in two or more folders


zhenkewu/nplcm documentation built on May 4, 2019, 10:19 p.m.