exampleSet: sample data, a subset of the C-MAP

In zhilongjia/GeneExpressionSignature: Gene Expression Signature based Similarity Metric

Description

sample data, a subset of the C-MAP as , which is a collection of 50 genome-wide transcriptional expression data from cultured human cells treated with 15 different small molecules.

Format

A ExpressionSet: assay data represents the 50 genome-wide transcriptional expression data, phenotypic data describes 15 different small molecules corresponds to the expression data (assay data).

References

http://www.sciencemag.org/content/313/5795/1929.short Lamb et al., The Connectivity Map: Using Gene-Expression Signatures to Connect Small Molecules, Genes, and Disease, science 2006

Examples

data(exampleSet)

zhilongjia/GeneExpressionSignature documentation built on May 4, 2019, 11:21 p.m.