R/data.R

#' @title lipidomics dataset from human isolated HDL
#'
#' @description A \code{\link{HTSet-class}} dataset of lipidomics analysis
#' from isolated HDL from 10 human subjects with 2x2 cross-over study design.
#' The data was obtained from the article published on \emph{Metabolomics} in
#' 2019 (doi.org/10.1007/s11306-019-1579-1)
#'
#' @docType data
#' @keywords datasets
#' @name lipidome
#' @usage data(lipidome)
#' @format A \code{\link{HTSet-class}} object
#'
#' @references
#' Zhu, C. et al., The HDL lipidome is widely remodeled by fast food versus
#' Mediterranean diet in 4 days. \emph{Metabolomics}, 2019 Aug 17;15(8):114.
#' doi: 10.1007/s11306-019-1579-1.
"lipidome"

#' @title exRNA from human isolated HDL
#' @description extra-cellular small RNA-seq gene counts from isolated HDL
#' from 3 human patients with systemic lupus erythematosus and 3 healthy
#' control.
#'
#' @docType data
#' @keywords datasets
#' @name exrna
#' @usage data(exrna)
#' @format A \code{\link{HTSet-class}} object
#'
#' @references https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE121865
"exrna"
zhuchcn/HTSet documentation built on April 10, 2020, 4:51 p.m.