Description Usage Arguments Examples
PIE.BHRejVec
produces pie plots given two BHRejVec objects. THey must be produced
with the same samVec objec and have the same FDR values but different test types.
1 2 3 4 |
obj, objEE |
Objects of BHRejVec class to be ploted. |
figcol |
An integer indicating the number of columns of figures plotted. |
graPar |
A list of parameters adjusting global graphics setting. |
mainPar |
A list of parameter adjusting the main title. |
innerPar |
A list of parameters adjusting the inner pie plots setting. |
innerPIE |
A list of parameters adjusting the pie plots setting. |
legPar |
A list of parameters adjusting legend. |
xshrink, yshrink |
Numeric values between 0 and 1 adjusting the height of figures and width. |
... |
ignored |
1 2 3 4 5 6 7 8 9 | data(GCwPADataA)
t1 = samVec(GCwPADataA, selCol = list(1:5, 6:10, 11:15, 16:20, 21:25, 26:30), labels = LETTERS[1:6])
EE = BHRejVec(FDR = c(0.1, 0.05, 0.01, 0.005, 0.001), SVobj = t1)
DE = BHRejVec(FDR = c(0.1, 0.05, 0.01, 0.005, 0.001), SVobj = t1, ifF = TRUE)
pdf("test.pdf", width = 12, height = 8)
PIE(DE, EE, figcol = 3, mainPar = list(y = 1.5, main = "TITLE", cex = 2.5),
innerPIE = list(radius = 1, col = c("blue", "red", "green")),
innerPar = list(mar = c(1.1, 2.1, 6.1, 0)), legPar = list(x = "bottomright", cex = 1.5))
dev.off()
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