featAbundance: Feature plot module - server
In zoecastillo/microbiomeExplorer: Microbiome Exploration App

featAbundance

R Documentation

Feature plot module - server

Description

Feature plot module - server

Usage

featAbundance(
  input,
  output,
  session,
  aggDat,
  featLevel,
  intraSettings,
  selectedFeat,
  featName,
  numOfFeats,
  ylabMode,
  normalizedData,
  reset
)

Arguments

`input`	shiny input
`output`	shiny output
`session`	shiny session
`aggDat`	aggregated MRExperiment
`featLevel`	chosen feature level (aggregation level)
`intraSettings`	analysis settings passed over from analysis input module
`selectedFeat`	feature selected via drop down element of analysis input
`featName`	plotly click event passed via relative abundance
`numOfFeats`	number of features shown in relative abundance plot (affects plotly click data)
`ylabMode`	character indication if raw \"Reads\" or \"Percentage\" should be shown
`normalizedData`	boolean indicating whether data has been normalized
`reset`	boolean reactive which resets the module if TRUE