featAbundance: Feature plot module - server

View source: R/intra_module.R

featAbundanceR Documentation

Feature plot module - server

Description

Feature plot module - server

Usage

featAbundance(
  input,
  output,
  session,
  aggDat,
  featLevel,
  intraSettings,
  selectedFeat,
  featName,
  numOfFeats,
  ylabMode,
  normalizedData,
  reset
)

Arguments

input

shiny input

output

shiny output

session

shiny session

aggDat

aggregated MRExperiment

featLevel

chosen feature level (aggregation level)

intraSettings

analysis settings passed over from analysis input module

selectedFeat

feature selected via drop down element of analysis input

featName

plotly click event passed via relative abundance

numOfFeats

number of features shown in relative abundance plot (affects plotly click data)

ylabMode

character indication if raw \"Reads\" or \"Percentage\" should be shown

normalizedData

boolean indicating whether data has been normalized

reset

boolean reactive which resets the module if TRUE

Value

R code needed to build the feature plot

Author(s)

Janina Reeder


zoecastillo/microbiomeExplorer documentation built on Sept. 11, 2022, 7:40 a.m.