API for zoecastillo/microbiomeExplorer
Microbiome Exploration App

Global functions
.onLoad	Source code
abundanceHeatmap	Man page Source code
abundanceHeatmapUI	Man page Source code
addFeatData	Man page Source code
addPhenoData	Man page Source code
add_plotly_config	Man page Source code
add_plotly_layout	Man page Source code
adjustPhenoColCode	Source code
aggFeatures	Man page Source code
aggregationTab	Man page Source code
aggregationTabUI	Man page Source code
alphaDiversity	Man page Source code
alphaDiversityUI	Man page Source code
avgAbundance	Man page Source code
avgAbundanceUI	Man page Source code
betaDiversity	Man page Source code
betaDiversityUI	Man page Source code
betaInput	Man page Source code
betaInputUI	Man page Source code
buildEmptyPlotlyPlot	Man page Source code
buildPlottingDF	Man page Source code
calculatePCAs	Man page Source code
computeCI_Interval	Man page Source code
computeDistMat	Man page Source code
corrAnalysis	Man page Source code
corrAnalysisUI	Man page Source code
corrFeature	Man page Source code
corrInput	Man page Source code
corrInputUI	Man page Source code
corrPhenotype	Man page Source code
createHeader	Man page Source code
dataInput	Man page Source code
dataInputUI	Man page Source code
designPairs	Man page Source code
diffAnalysis	Man page Source code
diffAnalysisUI	Man page Source code
diffInput	Man page Source code
diffInputUI	Man page Source code
diffTable	Man page Source code
diffTableUI	Man page Source code
extendPhenoData	Man page Source code
featAbundance	Man page Source code
featAbundanceUI	Man page Source code
featureAnalysis	Man page Source code
featureAnalysisUI	Man page Source code
featureCorr	Man page Source code
featureCorrUI	Man page Source code
featureInput	Man page Source code
featureInputUI	Man page Source code
featureTable	Man page
featureTableUI	Man page
fileUpload	Man page Source code
fileUploadUI	Man page Source code
filterByPheno	Man page Source code
filterMEData	Man page Source code
generateReport	Man page Source code
getFeatModCode	Man page
getFeatSplitCode	Man page
getFileType	Man page Source code
getFilterChoices	Man page Source code
getLegendLevel	Man page Source code
getPhenoChanges	Man page Source code
getPhenoModCode	Man page Source code
getWidths	Man page Source code
heatmapInput	Man page Source code
heatmapInputUI	Man page Source code
interAnalysis	Man page Source code
interAnalysisUI	Man page Source code
intraAnalysis	Man page Source code
intraAnalysisUI	Man page Source code
intraInput	Man page Source code
intraInputUI	Man page Source code
longAnalysis	Man page Source code
longAnalysisUI	Man page Source code
longInput	Man page Source code
longInputUI	Man page Source code
longResults	Man page Source code
longResultsUI	Man page Source code
makeQCPlot	Man page Source code
normalizeData	Man page Source code
parseInteractionName	Man page Source code
phenotypeCorr	Man page Source code
phenotypeCorrUI	Man page Source code
phenotypeTable	Man page Source code
phenotypeTableUI	Man page Source code
plotAbundance	Man page Source code
plotAlpha	Man page Source code
plotAvgAbundance	Man page Source code
plotBeta	Man page Source code
plotHeatmap	Man page Source code
plotLongFeature	Man page Source code
plotSingleFeature	Man page Source code
plotlyHistogram	Man page Source code
plotlySampleBarplot	Man page Source code
readData	Man page Source code
relAbundance	Man page Source code
relAbundanceUI	Man page Source code
replaceWithUnknown	Man page Source code
reportList	Man page Source code
reportListUI	Man page Source code
reportRow	Man page Source code
reportRowUI	Man page Source code
rollDownFeatures	Man page Source code
runDiffTest	Man page Source code
runMicrobiomeExplorer	Man page Source code
splitColumns	Source code