plot_cells: Plot Cells

In zolotarovgl/digiworm.plot: Useful plotting functions for Seurat objects

Description

This function plots the specific cells.

Usage

plot_cells(seurat_object, cells, alpha_neg = 0.1, reduction = "umap")

Arguments

seurat_object	the object to retrieve the data from.
cells	cells names (could be retrieved using Seurat::Cells())
alpha_neg	transparency value for negative points.
reduction	dimensionality reduction, could be c('pca','tsne','umap')

Examples

plot_positives()

zolotarovgl/digiworm.plot documentation built on May 6, 2019, 8:31 p.m.