plot_cluster: Plot Cluster
In zolotarovgl/digiworm.plot: Useful plotting functions for Seurat objects
Description
Usage
Arguments
Examples
Description
This function plots a desired cluster contained in the seurat object
Usage
1
2
plot_cluster(seurat_object, clusters, alpha_neg = 0.1,
reduction = "umap")
Arguments
seurat_object
the object to retrieve the data from.
clusters
cluster or cluster to plot cells from.
alpha_neg
transparency value for negative points.
reduction
dimensionality reduction, could be c('pca','tsne','umap')
Examples
1
zolotarovgl/digiworm.plot documentation built on May 6, 2019, 8:31 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Examples
Description
This function plots a desired cluster contained in the seurat object
Usage
1 2 | plot_cluster(seurat_object, clusters, alpha_neg = 0.1,
reduction = "umap")
|
Arguments
seurat_object |
the object to retrieve the data from. |
clusters |
cluster or cluster to plot cells from. |
alpha_neg |
transparency value for negative points. |
reduction |
dimensionality reduction, could be |
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.