BiomodModel: Model module: BiomodModel

In zoonproject/modules: Species Distribution Modelling Code Modules for the ZOON Package

Description

Model module wrapper for the biomod2 function BIOMOD_Modeling()

Usage

BiomodModel(.df, modelType = "GLM")

Arguments

.df	Internal parameter, do not use in the workflow function. .df is data frame that combines the occurrence data and covariate data. .df is passed automatically in workflow from the process module(s) to the model module(s) and should not be passed by the user.
modelType	A character to describe models to use. Select from 'GLM','GBM','GAM','CTA','ANN','SRE','FDA','MARS','RF','MAXENT'

Details

In order to fit a MaxEnt model, you must first download the MaxEnt executable file maxent.jar and save it in the correct location. The zoon function GetMaxEnt can orchestrate this for you. Running MaxEnt also requires an up-to-date version of java (which you may already have installed).

Version

1.0

Date submitted

2015-11-13

Data type

presence/background, presence/absence, abundance, proportion

Author(s)

ZOON Developers, [e-mail]

See Also

biomod2::BIOMOD_ModelingOptions

Other model: Domain, GBM, LogisticRegression, MachineLearn, MaxEnt, MaxLike, MaxNet, MyMaxLike, NullModel, OptGRaF, QuickGRaF, RandomForest, StochasticLogisticRegression, mgcv

zoonproject/modules documentation built on May 4, 2019, 11:25 p.m.