Files in zoonproject/modules

Species Distribution Modelling Code Modules for the ZOON Package

.Rbuildignore

.gitignore

.travis.yml

DESCRIPTION

LICENSE

MakeModuleList.R

ModuleList.csv

NAMESPACE

R/AIC.R R/AUC.R R/AddRandomUniformPredictors.R R/AirNCEP.R R/AnophelesPlumbeus.R R/Appify.R R/Background.R R/BackgroundAndCrossvalid.R R/Bioclim.R R/Bioclim_future.R R/BiomodModel.R R/Bootstrap.R R/CWBZimbabwe.R R/CarolinaWrenPA.R R/CarolinaWrenPO.R R/CarolinaWrenRasters.R R/CarolinaWrenValidation.R R/Clean.R R/CoefficientPlot.R R/CovHistograms.R R/Crossvalidate.R R/DataSummary.R R/Deviance.R R/Domain.R R/GBM.R R/GenerateCovariateReport.R R/InteractiveCovariateMap.R R/InteractiveMap.R R/InteractiveOccurrenceMap.R R/JitterOccurrence.R R/LocalOccurrenceData.R R/LocalOccurrenceDataFrame.R R/LocalRaster.R R/LogisticRegression.R R/LonLatToCovariates.R R/Lorem_ipsum_UK.R R/MESSMask.R R/MachineLearn.R R/MaxEnt.R R/MaxLike.R R/MaxNet.R R/ModulesDocumentation.R R/MyMaxLike.R R/NATrees.R R/NCEP.R R/NaiveRandomPresence.R R/NaiveRandomPresenceAbsence.R R/NaiveRandomRaster.R R/NoOutput.R R/NoProcess.R R/NullModel.R R/OneHundredBackground.R R/OneThousandBackground.R R/OptGRaF.R R/PairPlot.R R/PartitionDisc.R R/PerformanceMeasures.R R/PredictNewRasterMap.R R/PrintMap.R R/PrintOccurrenceMap.R R/QuickGRaF.R R/ROCcurve.R R/RandomForest.R R/ReliabilityPlot.R R/RemoveNAs.R R/ResponseCurve.R R/ResponseCurveViz.R R/ResponsePlot.R R/SameTimePlaceMap.R R/SeparatePA.R R/SpOcc.R R/StandardiseCov.R R/StochasticLogisticRegression.R R/SubsampleOccurrence.R R/SugarMaple.R R/SurfaceMap.R R/TargetGroupBackground.R R/Transform.R R/UKAir.R R/UKAnophelesPlumbeus.R R/UKBioclim.R R/VariableImportance.R R/addInteraction.R R/malariaAtlas_PR.R R/malariaAtlas_VecOcc.R R/malariaAtlas_covariates.R R/mgcv.R R/spThin.R README.md addDepends.R

docs/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/reference/AddRandomUniformPredictors.html

docs/reference/AirNCEP.html

docs/reference/AnophelesPlumbeus.html

docs/reference/Appify.html

docs/reference/Background.html

docs/reference/BackgroundAndCrossvalid.html

docs/reference/Bioclim.html

docs/reference/Bioclim_future.html

docs/reference/BiomodModel.html

docs/reference/Bootstrap.html

docs/reference/CWBZimbabwe.html

docs/reference/CarolinaWrenPA.html

docs/reference/CarolinaWrenPO.html

docs/reference/CarolinaWrenRasters.html

docs/reference/Clean.html

docs/reference/Crossvalidate.html

docs/reference/GBM.html

docs/reference/InteractiveCovariateMap.html

docs/reference/InteractiveMap.html

docs/reference/JitterOccurrence.html

docs/reference/LocalOccurrenceData.html

docs/reference/LocalRaster.html

docs/reference/LogisticRegression.html

docs/reference/Lorem_ipsum_UK.html

docs/reference/MESSMask.html

docs/reference/MachineLearn.html

docs/reference/MaxEnt.html

docs/reference/MaxLike.html

docs/reference/MyMaxLike.html

docs/reference/NATrees.html

docs/reference/NBNdataByName.html

docs/reference/NCEP.html

docs/reference/NaiveRandomPresence.html

docs/reference/NaiveRandomPresenceAbsence.html

docs/reference/NaiveRandomRaster.html

docs/reference/NoOutput.html

docs/reference/NoProcess.html

docs/reference/OneHundredBackground.html

docs/reference/OneThousandBackground.html

docs/reference/OptGRaF.html

docs/reference/PartitionDisc.html

docs/reference/PerformanceMeasures.html

docs/reference/PredictNewRasterMap.html

docs/reference/PrintMap.html

docs/reference/QuickGRaF.html

docs/reference/ROCcurve.html

docs/reference/RandomForest.html

docs/reference/ResponseCurve.html

docs/reference/ResponseCurveViz.html

docs/reference/SameTimePlaceMap.html

docs/reference/SeparatePA.html

docs/reference/SpOcc.html

docs/reference/StandardiseCov.html

docs/reference/StochasticLogisticRegression.html

docs/reference/SugarMaple.html

docs/reference/SurfaceMap.html

docs/reference/TargetGroupBackground.html

docs/reference/Transform.html

docs/reference/UKAir.html

docs/reference/UKAnophelesPlumbeus.html

docs/reference/UKBioclim.html

docs/reference/VariableImportance.html

docs/reference/addInteraction.html

docs/reference/index.html

docs/reference/mgcv.html

docs/reference/unknown-11.png

docs/reference/unknown-13.png

docs/reference/unknown-15.png

docs/reference/unknown-7.png

docs/reference/unknown-9.png

man/AIC.Rd man/AUC.Rd man/AddRandomUniformPredictors.Rd man/AirNCEP.Rd man/AnophelesPlumbeus.Rd man/Appify.Rd man/Background.Rd man/BackgroundAndCrossvalid.Rd man/Bioclim.Rd man/Bioclim_future.Rd man/BiomodModel.Rd man/Bootstrap.Rd man/CWBZimbabwe.Rd man/CarolinaWrenPA.Rd man/CarolinaWrenPO.Rd man/CarolinaWrenRasters.Rd man/CarolinaWrenValidation.Rd man/Clean.Rd man/CoefficientPlot.Rd man/CovHistograms.Rd man/Crossvalidate.Rd man/DataSummary.Rd man/Deviance.Rd man/Domain.Rd man/GBM.Rd man/GenerateCovariateReport.Rd man/InteractiveCovariateMap.Rd man/InteractiveMap.Rd man/InteractiveOccurrenceMap.Rd man/JitterOccurrence.Rd man/LocalOccurrenceData.Rd man/LocalOccurrenceDataFrame.Rd man/LocalRaster.Rd man/LogisticRegression.Rd man/LonLatToCovariates.Rd man/Lorem_ipsum_UK.Rd man/MESSMask.Rd man/MachineLearn.Rd man/MaxEnt.Rd man/MaxLike.Rd man/MaxNet.Rd man/MyMaxLike.Rd man/NATrees.Rd man/NCEP.Rd man/NaiveRandomPresence.Rd man/NaiveRandomPresenceAbsence.Rd man/NaiveRandomRaster.Rd man/NoOutput.Rd man/NoProcess.Rd man/NullModel.Rd man/OneHundredBackground.Rd man/OneThousandBackground.Rd man/OptGRaF.Rd man/PairPlot.Rd man/PartitionDisc.Rd man/PerformanceMeasures.Rd man/PredictNewRasterMap.Rd man/PrintMap.Rd man/PrintOccurrenceMap.Rd man/QuickGRaF.Rd man/ROCcurve.Rd man/RandomForest.Rd man/ReliabilityPlot.Rd man/RemoveNAs.Rd man/ResponseCurve.Rd man/ResponseCurveViz.Rd man/ResponsePlot.Rd man/SameTimePlaceMap.Rd man/SeparatePA.Rd man/SpOcc.Rd man/StandardiseCov.Rd man/StochasticLogisticRegression.Rd man/SubsampleOccurrence.Rd man/SugarMaple.Rd man/SurfaceMap.Rd man/TargetGroupBackground.Rd man/Transform.Rd man/UKAir.Rd man/UKAnophelesPlumbeus.Rd man/UKBioclim.Rd man/VariableImportance.Rd man/addInteraction.Rd man/malariaAtlas_PR.Rd man/malariaAtlas_covariates.Rd man/mgcv.Rd man/spThin.Rd moduleFunctions.R

modules.Rproj

tests/testthat.R

tests/testthat/.data_PA.rdata

tests/testthat/.data_PB.rdata

tests/testthat/.data_PO.rdata

tests/testthat/myData.csv

tests/testthat/myRaster.grd

tests/testthat/myRaster.gri

tests/testthat/testGenericTests.R zoon_sketch.R

zoonproject/modules documentation built on May 4, 2019, 11:25 p.m.