PrintOccurrenceMap: Output module: PrintOccurrenceMap

Description Usage Arguments Details Value Version Date submitted Author(s) See Also

Description

Plot a map of only occurrence data over the study area.

Usage

1
2
PrintOccurrenceMap(.model, .ras, plot = TRUE, dir = NULL, filename = NULL,
  size = c(480, 480), res = 72, ...)

Arguments

.model

Internal parameter, do not use in the workflow function. .model is list of a data frame (data) and a model object (model). .model is passed automatically in workflow, combining data from the model module(s) and process module(s), to the output module(s) and should not be passed by the user.

.ras

Internal parameter, do not use in the workflow function. .ras is a raster layer, brick or stack object. .ras is passed automatically in workflow from the covariate module(s) to the output module(s) and should not be passed by the user.

plot

If TRUE the plot will be displayed in the device

dir

Directory where plots are saved. If both dir and filename are NULL (default) then plots are not saved.

filename

The name to be given to the output as a character, don't include a file extension. If both dir and filename are NULL (default) then plots are not saved.

size

A vector containing the width and height of the output figure when writing to a png file. Example: c(800,600).

res

The output resolution in ppi when writing to a png file.

...

Parameters passed to sp::spplot, useful for setting title and axis labels e.g. xlab = 'Axis Label', main = 'My Plot Title'

Details

Based on the PrintMap module

Value

A Raster object giving the study area

Version

1.0

Date submitted

2017-03-07

Author(s)

Nick Golding, nick.golding.research@gmail.com

See Also

Other output: AIC, AUC, Appify, CoefficientPlot, CovHistograms, DataSummary, Deviance, GenerateCovariateReport, InteractiveCovariateMap, InteractiveMap, InteractiveOccurrenceMap, NoOutput, PairPlot, PerformanceMeasures, PredictNewRasterMap, PrintMap, ROCcurve, ReliabilityPlot, ResponseCurveViz, ResponseCurve, ResponsePlot, SameTimePlaceMap, SeparatePA, SurfaceMap, VariableImportance


zoonproject/modules documentation built on May 4, 2019, 11:25 p.m.