Description Usage Arguments Details Value Author(s) See Also Examples
View source: R/simulateRnaSeqData.R
Simulated expression data of an RNA-seq experiment.
1 2 | simulateRnaSeqData(output = c("matrix", "RangedSummarizedExperiment"),
n = 1000, m = 6, seed = 0L, ...)
|
output |
output type |
n |
number of genes |
m |
number of samples |
seed |
a single integer value specifying the random number generator seed |
... |
arguments passed to |
The count table is generated using the
makeExampleDESeqDataSet
method from the DESeq2
package.
Depending on the output
setting a matrix or an
RangedSummarizedExperiment
object.
Andrzej Ole<c5><9b> <andrzej.oles@embl.de>, 2016-2017
simulateNormFactors
1 2 3 4 5 6 7 | ## count data matrix
mx = simulateRnaSeqData()
head(mx)
## return an RangedSummarizedExperiment object
se = simulateRnaSeqData(output = "RangedSummarizedExperiment")
se
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.