Description Usage Arguments Value Examples
View source: R/gating-methods.R
It loads the gating methods by topological order and applies them to GatingSet
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Nothing. As the side effect, gates generated by gating methods are saved in GatingSet
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1 2 3 4 5 6 7 8 9 10 11 12 13 | ## Not run:
gt <- gatingTemplate(file.path(path, "data/ICStemplate.csv"), "ICS")
gs <- GatingSet(fs) #fs is a flowSet/ncdfFlowSet
gt_gating(gt, gs)
gt_gating(gt, gs, stop.at = "v") #proceed the gating until population 'v'
gt_gating(gt, gs, start = "v") # start from 'v'
gt_gating(gt, gs, parallel_type = "multicore", mc.cores = 8) #parallel gating using multicore
#parallel gating by using cluster
cl1 <- makeCluster (8, type = "MPI")
gt_gating(gt, gs, parallel_type = "cluster", cl = cl1)
stopCluster ( cl1 )
## End(Not run)
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