Description Usage Arguments Value Examples
Doing a CS analysis, interactively generating graphs. See specific type for additional parameteres.
Types:
Zhang and Gant
MFA
PCA
Sparse MFA
FABIA
1 2 | ## S4 method for signature 'matrix,matrix,character'
CSanalysis(refMat, querMat, type, ...)
|
refMat |
Reference matrix (Rows = genes and columns = compounds) |
querMat |
Query matrix |
type |
Type of Factor Analysis or Zhang & Gant ( |
... |
Additional parameters for analysis |
An object of the S4 Class CSresult
.
1 2 3 4 5 6 7 8 9 10 | ## Not run:
data("dataSIM",package="CSFA")
Mat1 <- dataSIM[,c(1:6)]
Mat2 <- dataSIM[,-c(1:6)]
MFA_analysis <- CSanalysis(Mat1,Mat2,"CSmfa")
FABIA_analysis <- CSanalysis(Mat1,Mat2,"CSfabia")
ZHANG_analysis <- CSanalysis(Mat1,Mat2,"CSzhang")
## End(Not run)
|
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