multi_gene_paths: Find the average degree of separation for a set of nodes...
In CandidateBacon: Provides a measure of the average connectedness among as set of candidate genes and a network-specific distribution of the connectedness of random gene pairs for an arbitrary network of pair wise interactions.

Description Usage Arguments Details Value See Also Examples

Calculate the average degrees of separation for multiple node pairs.

1	multi_gene_paths(in_network, interaction_list)

`in_network`	The network used for analysis
`interaction_list`	A two column matrix with all the pairwise interactions that need to be evaluated

This function allows the user to calculate the average DoS for multiple node pairs. The required input parameter is a list of interacting pairs and the search algorithm is applied to each pair. The average DoS for the set is returned.

A vector with the number of connections between each pair is returned.

See Also import_network, find_path

## Not run: 
network <- import_network("example_network_Cyt.txt")

candidate_gene_matrix <- as.data.frame(matrix(data = c("a","c","c","d","e","h","j","f","k","i","x","i"), ncol=2, byrow=T), stringsAsFactors = F)

multi_gene_separation <- multi_gene_paths(network,candidate_gene_matrix)

## End(Not run)