mufMaxPositions: Returns the maximum location of MUF score for specified...

In FIRMAGene: FIRMAGene - differential splicing for Affymetrix Gene 1.0 ST

Description

Reads the residuals, calculates the MUF score and locates the probe sequence that gave the maximum score and returns this.

Usage

mufMaxPositions(object, cls, idsOfInterest, clsOfInterest, verbose = TRUE)

Arguments

object	RmaPlm object
cls	grouping variable (as used with FIRMAGene
idsOfInterest	identifiers to retrieve location of MUF score for
clsOfInterest	samples to retrieve (must be a subset of cls and be the same length as idsOfInterest)
verbose	whether or not to display verbose output, default TRUE

Value

Returns a data.frame with the start and stop probe locations that give the maximum MUF score corresponding to the (identifier,sample class) pair that is given as input.

Author(s)

Mark Robinson

See Also

topSplices

Examples

##---- no example

FIRMAGene documentation built on May 2, 2019, 5:55 p.m.