SearchTerm: Function to search keywords for similar GO terms.

Description Usage Arguments Value Author(s) See Also Examples

View source: R/SearchTerm.R

Description

Providing a group of functional keywords, the function return a group of related GO IDs based on GO terms and their synonym terms.

Usage

1
SearchTerm(fun, fuzzy = FALSE, method = "union")

Arguments

fun

Charactors of a group of function keywords.

fuzzy

if TRUE, search for approximate matches of functional keywords. if FALSE, only search for matched keywords.

method

The method to combine GO terms from different keywords. If it is "union", the function return all matched terms. if it is "intersect", only overlapped functions are returned.

Value

A data.frame object including matched GOID, Ontology and Term.

Author(s)

Qiang Hu

See Also

SearchGene

Examples

1
SearchTerm("chromatin remodel")

FSim documentation built on May 2, 2019, 6:30 p.m.