g2go: Function to extract GO annotation and corresponding ancestor...
In FSim: A package to search functionally similar genes
Description
Usage
Arguments
Value
Author(s)
Examples
Description
The function is used to extract annotated GO terms including their
ancestor terms based on mapping information.
Usage
1
Arguments
gid
The gene ID to extract GO annotation.
tid
If tid is a group of GO IDs instead of NULL, the
ancestors of input GO IDs will return.
filter
The evidence code to filter GO terms.
map
The mapping between gene IDs to go IDs.
Value
A data frame including GO IDs, Evidence codes, Ontology and their
counts.
Author(s)
Qiang Hu
Examples
1
g2go("10")
FSim documentation built on May 2, 2019, 6:30 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
The function is used to extract annotated GO terms including their ancestor terms based on mapping information.
Usage
1 |
Arguments
gid |
The gene ID to extract GO annotation. |
tid |
If |
filter |
The evidence code to filter GO terms. |
map |
The mapping between gene IDs to go IDs. |
Value
A data frame including GO IDs, Evidence codes, Ontology and their counts.
Author(s)
Qiang Hu
Examples
1 | g2go("10")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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