an.Hs.egGO: an.Hs.egGO

In FSim: A package to search functionally similar genes

Description

An environment provides mappings between human entrez gene identifiers and the GO identifiers including their ancestors that they are associate with.

Usage

data(an.Hs.egGO)

Format

An environment

Source

The object can be produced by the function g2go. For example, g2go("10")

Examples

  
# #all genes
# hsgo <- as.list(org.Hs.egGO)
# gids <- names(hsgo) #42106

##environment
#gene to GO
# an.Hs.egGO <- new.env()
# for(i in 1:length(gids)){
#   assign(gids[i], g2go(gids[i]), envir=an.Hs.egGO)
# }

FSim documentation built on May 2, 2019, 6:30 p.m.