HTDA-package: HTDA-High Throghput Data Analysis
In HTDA: HTDA (High Throughput Data Analysis)
Description
Details
Author(s)
References
Description
This vignette describe the classes and objects implemented in HTDA package. The
Aim of HTDA package is to provide a single platform for the analysis of high thr
oghput data (RNASeq, LCMS and GCMS). HTDA currently is in developing phase and w
ill test it on real data. This package is completely free and open source.If you
use it, find any bug and in case of question then please contact us. We will ap
preciate any suggestion.
Details
Package: HTDA
Type: Package
Version: 1.0
Date: 2014-05-17
License: What license is it under?
Depends: Limma,xcms,PROcess,GOstats,amap,rtracklayer,Rsamtools,CAMERA,GOsta
ts,GenomicRanges
Author(s)
Reema Singh,Andrew M. Lynn and Yogendra Bhaskar
Maintainer: Who to complain to <reemasingh.jnu@gmail.com>
References
Smith, C.; Want, E.; O Maille, G.; Abagyan, R.; Siuzdak, G. Anal Chem 2006, 78,
779 787
Smyth, G. K. (2005). Limma: linear models for microarray data. In: Bioinformatic
s and Computational Biology Solutions using R and Bioconductor, R. Gentleman,V.
Carey, S. Dudoit, R. Irizarry, W. Huber (eds.), Springer, New York,pages 397-420
Lawrence et al.rtracklayer: an R package for interfacing with genome browsers.Bi
oinformatics (2009) 25 (14): 1841 1842.
HTDA documentation built on May 2, 2019, 4:53 p.m.
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Description Details Author(s) References
Description
This vignette describe the classes and objects implemented in HTDA package. The Aim of HTDA package is to provide a single platform for the analysis of high thr oghput data (RNASeq, LCMS and GCMS). HTDA currently is in developing phase and w ill test it on real data. This package is completely free and open source.If you use it, find any bug and in case of question then please contact us. We will ap preciate any suggestion.
Details
| Package: | HTDA |
| Type: | Package |
| Version: | 1.0 |
| Date: | 2014-05-17 |
| License: | What license is it under? |
| Depends: | Limma,xcms,PROcess,GOstats,amap,rtracklayer,Rsamtools,CAMERA,GOsta ts,GenomicRanges |
Author(s)
Reema Singh,Andrew M. Lynn and Yogendra Bhaskar
Maintainer: Who to complain to <reemasingh.jnu@gmail.com>
References
Smith, C.; Want, E.; O Maille, G.; Abagyan, R.; Siuzdak, G. Anal Chem 2006, 78, 779 787 Smyth, G. K. (2005). Limma: linear models for microarray data. In: Bioinformatic s and Computational Biology Solutions using R and Bioconductor, R. Gentleman,V. Carey, S. Dudoit, R. Irizarry, W. Huber (eds.), Springer, New York,pages 397-420 Lawrence et al.rtracklayer: an R package for interfacing with genome browsers.Bi oinformatics (2009) 25 (14): 1841 1842.
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