Description Usage Arguments Value Author(s) References See Also Examples
View source: R/IPMpack-Analyses.r
Estimates lifetime reproductive success from a full IPM, including survival, growth and fecundity.
1 | R0Calc(Pmatrix, Fmatrix)
|
Pmatrix |
a matrix (not necessarily of class IPMmatrix). |
Fmatrix |
a matrix (not necessarily of class IPMmatrix). |
numeric
C. Jessica E. Metcalf, Sean M. McMahon, Roberto Salguero-Gomez, Eelke Jongejans & Cory Merow.
Caswell, 2001. Matrix population models: analysis, construction and interpretation. 2nd ed. Sinauer. p126.
1 2 3 4 5 6 7 8 | dff <- generateData()
Pmatrix <- makeIPMPmatrix(minSize = min(dff$size, na.rm = TRUE),
maxSize = max(dff$size, na.rm = TRUE), growObj = makeGrowthObj(dff),
survObj = makeSurvObj(dff), correction="constant")
Fmatrix <- makeIPMFmatrix(minSize = min(dff$size, na.rm = TRUE),
maxSize = max(dff$size, na.rm = TRUE),
fecObj = makeFecObj(dff,Formula=fec~size), correction="constant")
R0Calc(Pmatrix, Fmatrix)
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