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mean_tipow <- function(ti_shp,log_lamb,qb_pwr) {
# Computes the mean of the power-transformed topographic index
# Author: Claudia Vitolo
#
# Args:
# ti_shp:
# log_lamb:
# qb_pwr:
#
# Returns:
# Mean of the power-transformed topographic index.
# internal variables
nbins <- 2000 # number of bins in pdf of topo index
ti_max <- 50 # maximum possible log-transformed index
# preliminaries: get parameters of the gamma distribution [ti_shp = shape of the gamma distribution (the "2nd" parameter)]
ti_off <- 3 # offset in the gamma distribution (the "3rd" parameter)
ti_chi <- (log_lamb - ti_off) / ti_shp # chi -- loglamb is the first parameter (mean)
# loop through the frequency distribution
lowerv <- 0
lowerp <- 0
avepow <- 0
for (ibin in 1:nbins) {
# get probability for the current bin
upperv <- (ibin/nbins) * ti_max # upper value in frequency bin
gmarg2 <- max(0, upperv - ti_off) / ti_chi # 1st argument to the gamma function
upperp <- pgamma(gmarg2,ti_shp) # gammp is the incomplete gamma function
probin <- upperp - lowerp # probability of the current bin
# get the scaled topographic index value
logval <- 0.5 * (lowerv + upperv) # log-transformed index for the current bin
powval <- (exp(logval))^(1/qb_pwr) # power-transformed index for the current bin
avepow <- avepow + powval*probin # average power-transformed index
# save the lower value and probability
lowerv <- upperv # lower value for the next bin
lowerp <- upperp # cumulative probability for the next bin
}
maxpow <- powval
powlamb <- avepow
results <-c(maxpow,powlamb)
return(results)
}
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