RSiena: Siena - Simulation Investigation for Empirical Network Analysis

Statistical modelling for longitudinal network data using stochastic actor-oriented models.

AuthorRuth Ripley, Krists Boitmanis, Tom A.B. Snijders, Felix Schoenenberger
Date of publication2016-10-14 17:35:19
MaintainerTom A.B. Snijders <tom.snijders@nuffield.ox.ac.uk>
LicenseGPL (>= 3)
Version1.1-304
http://www.stats.ox.ac.uk/~snijders/siena

View on R-Forge

Man pages

allEffects: Internal data frame used to construct effect objects.

coCovar: Function to create a constant covariate object

coDyadCovar: Function to create a constant dyadic covariate object.

edit.sienaEffects: Allow editing of a sienaEffects object if a gui is available.

effectsDocumentation: Function to create a table of documentation of effect names,...

getEffects: Function to create a Siena effects object

hn3401: Network data: excerpt from "Dutch Social Behavior Data Set"...

includeEffects: Function to include effects in a Siena model

includeInteraction: Function to create user-specified interactions for a Siena...

includeTimeDummy: Function to include time dummy effects in a Siena model

iwlsm: Function to fit an iterated weighted least squares model.

maxlikefn: A ML version of FRAN

n3401: Network data: excerpt from "Dutch Social Behavior Data Set"...

plot.sienaTimeTest: Functions to plot assessment of time heterogeneity of...

print01Report: Function to produce the Siena01 report from R objects

print.sienaEffects: Print methods for Siena effects objects

print.sienaMeta: Methods for processing sienaMeta objects

RSiena-package: Simulation Investigation for Empirical Network Analysis

s50: Network data: excerpt from "Teenage Friends and Lifestyle...

s501: Network 1 data: excerpt from "Teenage Friends and Lifestyle...

s502: Network 2 data: excerpt from "Teenage Friends and Lifestyle...

s503: Network 3 data: excerpt from "Teenage Friends and Lifestyle...

s50a: Alcohol use data: excerpt from "Teenage Friends and Lifestyle...

s50s: Smoking data: excerpt from "Teenage Friends and Lifestyle...

setEffect: Function to set various columns in an effects object in a...

siena07: Function to estimate parameters in a Siena model

siena08: Function to perform a meta analysis of a collection of Siena...

sienaAlgorithmCreate: Function to create an object containing the algorithm...

sienaCompositionChange: Functions to create a Siena composition change object

sienaDataConstraint: Function to change the values of the constraints between...

sienaDataCreate: Function to create a Siena data object

sienaDependent: Function to create a dependent variable for a Siena model

sienaFit: Methods for processing sienaFit objects, produced by...

sienaGOF: Functions to assess goodness of fit for SAOMs

sienaGOF-auxiliary: Auxiliary functions for goodness of fit assessment by...

sienaGroupCreate: Function to group together several Siena data objects

sienaNodeSet: Function to create a node set

sienaRI: Functions to assess the relative importance of effects at...

sienaTimeTest: Functions to assess and account for time heterogeneity of...

simstats0c: Versions of FRAN

summary.iwlsm: Summary method for Iterative Weighted Least Squares Models

tmp3: van de Bunt's Freshman dataset, time point 3

tmp4: van de Bunt's Freshman dataset, time point 4

updateTheta: Function to update the initial values of theta.

varCovar: Function to create a changing covariate object.

varDyadCovar: Function to create a changing dyadic covariate object.

Wald: Wald tests for RSiena results

xtable: Access xtable in package xtable

Functions

allEffects Man page
BehaviorDistribution Man page
behaviorExtraction Man page
coCovar Man page
coDyadCovar Man page
descriptives.sienaGOF Man page
edit.sienaEffects Man page
effectsDocumentation Man page
entropy Man page
getEffects Man page
hn3401 Man page
HN3401 Man page
HN3403 Man page
HN3404 Man page
HN3406 Man page
includeEffects Man page
includeInteraction Man page
includeTimeDummy Man page
IndegreeDistribution Man page
initializeFRAN Man page
iwlsm Man page
iwlsm.default Man page
iwlsm.formula Man page
maxlikec Man page
maxlikefn Man page
model.create Man page
Multipar.RSiena Man page
n3401 Man page
N3401 Man page
N3403 Man page
N3404 Man page
N3406 Man page
networkExtraction Man page
OutdegreeDistribution Man page
plot.sienaGOF Man page
plot.sienaMeta Man page
plot.sienaRI Man page
plot.sienaTimeTest Man page
predict.iwlsm Man page
print01Report Man page
print.iwlsm Man page
print.sienaEffects Man page
print.sienaFit Man page
print.sienaMeta Man page
print.sienaRI Man page
print.summary.iwlsm Man page
print.summary.sienaEffects Man page
print.summary.sienaFit Man page
print.summary.sienaMeta Man page
print.xtable.sienaFit Man page
psi.iwlsm Man page
RSiena Man page
RSiena-package Man page
s50 Man page
s501 Man page
s502 Man page
s503 Man page
s50a Man page
s50s Man page
setEffect Man page
siena Man page
siena07 Man page
siena08 Man page
sienaAlgorithm Man page
sienaAlgorithmCreate Man page
sienaCompositionChange Man page
sienaCompositionChangeFromFile Man page
sienaDataConstraint Man page
sienaDataCreate Man page
sienaDependent Man page
sienaEffects Man page
sienaFit Man page
sienaFit.methods Man page
sienaGOF Man page
sienaGOF-auxiliary Man page
sienaGroup Man page
sienaGroupCreate Man page
sienaGroupEffects Man page
sienaMeta Man page
sienaModel Man page
sienaModelCreate Man page
sienaNet Man page
sienaNodeSet Man page
sienaRI Man page
sienaRI.methods Man page
siena.table Man page
sienaTimeTest Man page
simstats0c Man page
sparseMatrixExtraction Man page
summary.iwlsm Man page
summary.sienaEffects Man page
summary.sienaFit Man page
summary.sienaMeta Man page
terminateFRAN Man page
tmp3 Man page
tmp4 Man page
updateTheta Man page
varCovar Man page
varDyadCovar Man page
Wald.RSiena Man page
xtable Man page
xtable.sienaFit Man page

Files

.Rinstignore
ChangeLog
DESCRIPTION
NAMESPACE
R
R/RSienaRDocumentation.r R/Sienatest.r R/effects.r R/effectsDocumentation.r R/effectsMethods.r R/getActorStatistics.r R/getTargets.r R/globals.r R/initializeFRAN.r R/iwlsm.R R/maxlike.r R/maxlikec.r R/maxlikecalc.r R/observationErrors.r R/phase1.r R/phase2.r R/phase3.r R/print01Report.r R/print07Report.r R/printDataReport.r R/printInitialDescription.r R/robmon.r R/siena07.r R/siena07gui.r R/siena08.r R/sienaDataCreate.r R/sienaGOF.r R/sienaModelCreate.r R/sienaRI.r R/sienaRIDynamics.r R/sienaTimeTest.r R/sienaeffects.r R/sienaprint.r R/sienatable.r R/sienautils.r R/simstatsc.r R/terminateFRAN.r R/zzz.R
cleanup
cleanup.win
configure
configure.ac
configure.win
data
data/RSiena.rda
data/allEffects.R
data/allEffects.csv
inst
inst/doc
inst/doc/ilcampo.jpg
inst/examples
inst/examples/CBE1.DAT
inst/examples/CBE3.DAT
inst/examples/CBE4.DAT
inst/examples/CBE6.DAT
inst/examples/EIES1.dat
inst/examples/EIES2.dat
inst/examples/EIESATD.dat
inst/examples/EIESATT.dat
inst/examples/FR0.DAT
inst/examples/FR1.DAT
inst/examples/FR2.DAT
inst/examples/FR3.DAT
inst/examples/FR4.DAT
inst/examples/FR5.DAT
inst/examples/FR6.DAT
inst/examples/HN34_1.DAT
inst/examples/HN34_3.DAT
inst/examples/HN34_4.DAT
inst/examples/HN34_6.DAT
inst/examples/N34_1.DAT
inst/examples/N34_3.DAT
inst/examples/N34_4.DAT
inst/examples/N34_6.DAT
inst/examples/Sampson_t2.txt
inst/examples/Sampson_t3.txt
inst/examples/Sampson_t4.txt
inst/examples/VARS.DAT
inst/examples/VRND32T0.DAT
inst/examples/VRND32T1.DAT
inst/examples/VRND32T2.DAT
inst/examples/VRND32T3.DAT
inst/examples/VRND32T4.DAT
inst/examples/VRND32T5.DAT
inst/examples/VRND32T6.DAT
inst/examples/arclistdata.dat
inst/examples/baerveldt3.csv
inst/examples/baerveldt34.csv
inst/examples/baerveldt4.csv
inst/examples/cbc1.dat
inst/examples/cbc3.dat
inst/examples/cbc6.dat
inst/examples/cbe1.sim
inst/examples/cbe3.sim
inst/examples/cbe4.sim
inst/examples/cbe6.sim
inst/examples/eies.csv
inst/examples/klas12b-advice.dat
inst/examples/klas12b-alcohol.dat
inst/examples/klas12b-delinquency.dat
inst/examples/klas12b-demographics.dat
inst/examples/klas12b-net-1.dat
inst/examples/klas12b-net-2.dat
inst/examples/klas12b-net-3.dat
inst/examples/klas12b-net-3m.dat
inst/examples/klas12b-net-4.dat
inst/examples/klas12b-net-4m.dat
inst/examples/klas12b-present.dat
inst/examples/klas12b-primary.dat
inst/examples/klas12b_net.csv
inst/examples/klas12b_neta.csv
inst/examples/klas12b_netbeh.csv
inst/examples/klas12b_netbeha.csv
inst/examples/s50-alc2.dat
inst/examples/s50-alcohol.dat
inst/examples/s50-dr2.dat
inst/examples/s50-network1.dat
inst/examples/s50-network2.dat
inst/examples/s50-network3.dat
inst/examples/s50-smoke.dat
inst/examples/s50-sp2.dat
inst/examples/s50-sport.dat
inst/examples/s50_d1.net
inst/examples/s50_d2.net
inst/examples/s50_d3.net
inst/examples/s50_s_asp.csv
inst/examples/s50_sa.csv
inst/examples/s50e.dat
inst/examples/sienafreshman.csv
inst/examples/tmp3a.dat
inst/examples/tmp4a.dat
inst/examples/vandebunt.csv
inst/examples/vtextexoreal.dat
inst/ilcampo.gif
inst/scripts
inst/scripts/RSienaSNADescriptives.R inst/scripts/Rscript01DataFormat.R inst/scripts/Rscript02SienaVariableFormat.R inst/scripts/Rscript03SienaRunModel.R inst/scripts/Rscript04SienaBehaviour.R
inst/sienascript
man
man/RSiena-package.Rd man/Wald.Rd man/allEffects.Rd man/coCovar.Rd man/coDyadCovar.Rd man/edit.sienaEffects.Rd man/effectsDocumentation.Rd man/getEffects.Rd man/hn3401.Rd man/includeEffects.Rd man/includeInteraction.Rd man/includeTimeDummy.Rd man/iwlsm.Rd man/maxlikefn.Rd man/n3401.Rd man/plot.sienaTimeTest.Rd man/print.sienaEffects.Rd man/print.sienaMeta.Rd man/print01Report.Rd man/s50.Rd man/s501.Rd man/s502.Rd man/s503.Rd man/s50a.Rd man/s50s.Rd man/setEffect.Rd man/siena07.Rd man/siena08.Rd man/sienaAlgorithmCreate.Rd man/sienaCompositionChange.Rd man/sienaDataConstraint.Rd man/sienaDataCreate.Rd man/sienaDependent.Rd man/sienaFit.Rd man/sienaGOF-auxiliary.Rd man/sienaGOF.Rd man/sienaGroupCreate.Rd man/sienaNodeSet.Rd man/sienaRI.Rd man/sienaTimeTest.Rd man/simstats0c.Rd man/summary.iwlsm.Rd man/tmp3.Rd man/tmp4.Rd man/updateTheta.Rd man/varCovar.Rd man/varDyadCovar.Rd man/xtable.Rd
po
po/R-RSiena.pot
po/R-ko.po
src
src/Makevars.in
src/data
src/data/ActorSet.cpp
src/data/ActorSet.h
src/data/BehaviorLongitudinalData.cpp
src/data/BehaviorLongitudinalData.h
src/data/ChangingCovariate.cpp
src/data/ChangingCovariate.h
src/data/ChangingDyadicCovariate.cpp
src/data/ChangingDyadicCovariate.h
src/data/ConstantCovariate.cpp
src/data/ConstantCovariate.h
src/data/ConstantDyadicCovariate.cpp
src/data/ConstantDyadicCovariate.h
src/data/Covariate.cpp
src/data/Covariate.h
src/data/Data.cpp
src/data/Data.h
src/data/DyadicCovariate.cpp
src/data/DyadicCovariate.h
src/data/DyadicCovariateValueIterator.cpp
src/data/DyadicCovariateValueIterator.h
src/data/ExogenousEvent.cpp
src/data/ExogenousEvent.h
src/data/LongitudinalData.cpp
src/data/LongitudinalData.h
src/data/NetworkConstraint.cpp
src/data/NetworkConstraint.h
src/data/NetworkLongitudinalData.cpp
src/data/NetworkLongitudinalData.h
src/data/OneModeNetworkLongitudinalData.cpp
src/data/OneModeNetworkLongitudinalData.h
src/model
src/model/EffectInfo.cpp
src/model/EffectInfo.h
src/model/EpochSimulation.cpp
src/model/EpochSimulation.h
src/model/Function.cpp
src/model/Function.h
src/model/Model.cpp
src/model/Model.h
src/model/SimulationActorSet.cpp
src/model/SimulationActorSet.h
src/model/State.cpp
src/model/State.h
src/model/StatisticCalculator.cpp
src/model/StatisticCalculator.h
src/model/effects
src/model/effects/AllEffects.h
src/model/effects/AlterCovariateActivityEffect.cpp
src/model/effects/AlterCovariateActivityEffect.h
src/model/effects/AltersCovariateAvAltEffect.cpp
src/model/effects/AltersCovariateAvAltEffect.h
src/model/effects/AltersCovariateAvSimEffect.cpp
src/model/effects/AltersCovariateAvSimEffect.h
src/model/effects/AltersCovariateAverageEffect.cpp
src/model/effects/AltersCovariateAverageEffect.h
src/model/effects/AltersCovariateTotSimEffect.cpp
src/model/effects/AltersCovariateTotSimEffect.h
src/model/effects/AltersDist2CovariateAverageEffect.cpp
src/model/effects/AltersDist2CovariateAverageEffect.h
src/model/effects/AltersInDist2CovariateAverageEffect.cpp
src/model/effects/AltersInDist2CovariateAverageEffect.h
src/model/effects/AntiIsolateEffect.cpp
src/model/effects/AntiIsolateEffect.h
src/model/effects/AverageAlterDist2Effect.cpp
src/model/effects/AverageAlterDist2Effect.h
src/model/effects/AverageAlterEffect.cpp
src/model/effects/AverageAlterEffect.h
src/model/effects/AverageAlterInDist2Effect.cpp
src/model/effects/AverageAlterInDist2Effect.h
src/model/effects/AverageInAlterEffect.cpp
src/model/effects/AverageInAlterEffect.h
src/model/effects/AverageReciprocatedAlterEffect.cpp
src/model/effects/AverageReciprocatedAlterEffect.h
src/model/effects/BalanceEffect.cpp
src/model/effects/BalanceEffect.h
src/model/effects/BehaviorEffect.cpp
src/model/effects/BehaviorEffect.h
src/model/effects/BehaviorInteractionEffect.cpp
src/model/effects/BehaviorInteractionEffect.h
src/model/effects/BetweennessEffect.cpp
src/model/effects/BetweennessEffect.h
src/model/effects/CovariateAlterEffect.cpp
src/model/effects/CovariateAlterEffect.h
src/model/effects/CovariateAndNetworkBehaviorEffect.cpp
src/model/effects/CovariateAndNetworkBehaviorEffect.h
src/model/effects/CovariateDependentBehaviorEffect.cpp
src/model/effects/CovariateDependentBehaviorEffect.h
src/model/effects/CovariateDependentNetworkEffect.cpp
src/model/effects/CovariateDependentNetworkEffect.h
src/model/effects/CovariateDiffEffect.cpp
src/model/effects/CovariateDiffEffect.h
src/model/effects/CovariateDiffEgoEffect.cpp
src/model/effects/CovariateDiffEgoEffect.h
src/model/effects/CovariateEgoAlterEffect.cpp
src/model/effects/CovariateEgoAlterEffect.h
src/model/effects/CovariateEgoEffect.cpp
src/model/effects/CovariateEgoEffect.h
src/model/effects/CovariateEgoSquaredEffect.cpp
src/model/effects/CovariateEgoSquaredEffect.h
src/model/effects/CovariateIndirectTiesEffect.cpp
src/model/effects/CovariateIndirectTiesEffect.h
src/model/effects/CovariateSimilarityEffect.cpp
src/model/effects/CovariateSimilarityEffect.h
src/model/effects/DenseTriadsBehaviorEffect.cpp
src/model/effects/DenseTriadsBehaviorEffect.h
src/model/effects/DenseTriadsEffect.cpp
src/model/effects/DenseTriadsEffect.h
src/model/effects/DenseTriadsSimilarityEffect.cpp
src/model/effects/DenseTriadsSimilarityEffect.h
src/model/effects/DensityEffect.cpp
src/model/effects/DensityEffect.h
src/model/effects/DiffusionRateEffect.cpp
src/model/effects/DiffusionRateEffect.h
src/model/effects/DistanceTwoEffect.cpp
src/model/effects/DistanceTwoEffect.h
src/model/effects/DoubleDegreeBehaviorEffect.cpp
src/model/effects/DoubleDegreeBehaviorEffect.h
src/model/effects/DoubleInPopEffect.cpp
src/model/effects/DoubleInPopEffect.h
src/model/effects/DoubleOutActEffect.cpp
src/model/effects/DoubleOutActEffect.h
src/model/effects/DoubleRecDegreeBehaviorEffect.cpp
src/model/effects/DoubleRecDegreeBehaviorEffect.h
src/model/effects/DyadicCovariateAndNetworkBehaviorEffect.cpp
src/model/effects/DyadicCovariateAndNetworkBehaviorEffect.h
src/model/effects/DyadicCovariateAvAltEffect.cpp
src/model/effects/DyadicCovariateAvAltEffect.h
src/model/effects/DyadicCovariateDependentNetworkEffect.cpp
src/model/effects/DyadicCovariateDependentNetworkEffect.h
src/model/effects/DyadicCovariateMainEffect.cpp
src/model/effects/DyadicCovariateMainEffect.h
src/model/effects/DyadicCovariateReciprocityEffect.cpp
src/model/effects/DyadicCovariateReciprocityEffect.h
src/model/effects/Effect.cpp
src/model/effects/Effect.h
src/model/effects/EffectFactory.cpp
src/model/effects/EffectFactory.h
src/model/effects/FourCyclesEffect.cpp
src/model/effects/FourCyclesEffect.h
src/model/effects/HigherCovariateEffect.cpp
src/model/effects/HigherCovariateEffect.h
src/model/effects/HomCovariateActivityEffect.cpp
src/model/effects/HomCovariateActivityEffect.h
src/model/effects/HomCovariateTransitiveTripletsEffect.cpp
src/model/effects/HomCovariateTransitiveTripletsEffect.h
src/model/effects/InAltersCovariateAverageEffect.cpp
src/model/effects/InAltersCovariateAverageEffect.h
src/model/effects/InInDegreeAssortativityEffect.cpp
src/model/effects/InInDegreeAssortativityEffect.h
src/model/effects/InIsolateDegreeEffect.cpp
src/model/effects/InIsolateDegreeEffect.h
src/model/effects/InOutDegreeAssortativityEffect.cpp
src/model/effects/InOutDegreeAssortativityEffect.h
src/model/effects/InStructuralEquivalenceEffect.cpp
src/model/effects/InStructuralEquivalenceEffect.h
src/model/effects/IndegreeActivityEffect.cpp
src/model/effects/IndegreeActivityEffect.h
src/model/effects/IndegreeEffect.cpp
src/model/effects/IndegreeEffect.h
src/model/effects/IndegreePopularityEffect.cpp
src/model/effects/IndegreePopularityEffect.h
src/model/effects/InteractionCovariateEffect.cpp
src/model/effects/InteractionCovariateEffect.h
src/model/effects/InverseOutdegreeEffect.cpp
src/model/effects/InverseOutdegreeEffect.h
src/model/effects/InverseSquaredOutdegreeEffect.cpp
src/model/effects/InverseSquaredOutdegreeEffect.h
src/model/effects/IsolateEffect.cpp
src/model/effects/IsolateEffect.h
src/model/effects/IsolateNetEffect.cpp
src/model/effects/IsolateNetEffect.h
src/model/effects/IsolatePopEffect.cpp
src/model/effects/IsolatePopEffect.h
src/model/effects/JumpCovariateTransitiveTripletsEffect.cpp
src/model/effects/JumpCovariateTransitiveTripletsEffect.h
src/model/effects/LinearShapeEffect.cpp
src/model/effects/LinearShapeEffect.h
src/model/effects/MainCovariateEffect.cpp
src/model/effects/MainCovariateEffect.h
src/model/effects/MaxAlterEffect.cpp
src/model/effects/MaxAlterEffect.h
src/model/effects/MixedNetworkEffect.cpp
src/model/effects/MixedNetworkEffect.h
src/model/effects/NetworkDependentBehaviorEffect.cpp
src/model/effects/NetworkDependentBehaviorEffect.h
src/model/effects/NetworkEffect.cpp
src/model/effects/NetworkEffect.h
src/model/effects/NetworkInteractionEffect.cpp
src/model/effects/NetworkInteractionEffect.h
src/model/effects/OutInDegreeAssortativityEffect.cpp
src/model/effects/OutInDegreeAssortativityEffect.h
src/model/effects/OutOutDegreeAssortativityEffect.cpp
src/model/effects/OutOutDegreeAssortativityEffect.h
src/model/effects/OutdegreeActivityEffect.cpp
src/model/effects/OutdegreeActivityEffect.h
src/model/effects/OutdegreeActivitySqrtEffect.cpp
src/model/effects/OutdegreeActivitySqrtEffect.h
src/model/effects/OutdegreeEffect.cpp
src/model/effects/OutdegreeEffect.h
src/model/effects/OutdegreePopularityEffect.cpp
src/model/effects/OutdegreePopularityEffect.h
src/model/effects/PopularityAlterEffect.cpp
src/model/effects/PopularityAlterEffect.h
src/model/effects/QuadraticShapeEffect.cpp
src/model/effects/QuadraticShapeEffect.h
src/model/effects/RecipdegreeActivityEffect.cpp
src/model/effects/RecipdegreeActivityEffect.h
src/model/effects/RecipdegreePopularityEffect.cpp
src/model/effects/RecipdegreePopularityEffect.h
src/model/effects/ReciprocalDegreeBehaviorEffect.cpp
src/model/effects/ReciprocalDegreeBehaviorEffect.h
src/model/effects/ReciprocatedSimilarityEffect.cpp
src/model/effects/ReciprocatedSimilarityEffect.h
src/model/effects/ReciprocityEffect.cpp
src/model/effects/ReciprocityEffect.h
src/model/effects/SameCovariateActivityEffect.cpp
src/model/effects/SameCovariateActivityEffect.h
src/model/effects/SameCovariateEffect.cpp
src/model/effects/SameCovariateEffect.h
src/model/effects/SameCovariateFourCyclesEffect.cpp
src/model/effects/SameCovariateFourCyclesEffect.h
src/model/effects/SameCovariateTransitiveTripletsEffect.cpp
src/model/effects/SameCovariateTransitiveTripletsEffect.h
src/model/effects/SimilarityEffect.cpp
src/model/effects/SimilarityEffect.h
src/model/effects/SimilarityTransitiveTripletsEffect.cpp
src/model/effects/SimilarityTransitiveTripletsEffect.h
src/model/effects/SimilarityWEffect.cpp
src/model/effects/SimilarityWEffect.h
src/model/effects/StructuralRateEffect.cpp
src/model/effects/StructuralRateEffect.h
src/model/effects/ThreeCyclesEffect.cpp
src/model/effects/ThreeCyclesEffect.h
src/model/effects/TransitiveMediatedTripletsEffect.cpp
src/model/effects/TransitiveMediatedTripletsEffect.h
src/model/effects/TransitiveReciprocatedTriplets2Effect.cpp
src/model/effects/TransitiveReciprocatedTriplets2Effect.h
src/model/effects/TransitiveReciprocatedTripletsEffect.cpp
src/model/effects/TransitiveReciprocatedTripletsEffect.h
src/model/effects/TransitiveTiesEffect.cpp
src/model/effects/TransitiveTiesEffect.h
src/model/effects/TransitiveTriadsEffect.cpp
src/model/effects/TransitiveTriadsEffect.h
src/model/effects/TransitiveTripletsEffect.cpp
src/model/effects/TransitiveTripletsEffect.h
src/model/effects/TruncatedOutdegreeEffect.cpp
src/model/effects/TruncatedOutdegreeEffect.h
src/model/effects/TwoNetworkDependentBehaviorEffect.cpp
src/model/effects/TwoNetworkDependentBehaviorEffect.h
src/model/effects/WWXClosureEffect.cpp
src/model/effects/WWXClosureEffect.h
src/model/effects/WXXClosureEffect.cpp
src/model/effects/WXXClosureEffect.h
src/model/effects/XWXClosureEffect.cpp
src/model/effects/XWXClosureEffect.h
src/model/effects/generic
src/model/effects/generic/AlterFunction.cpp
src/model/effects/generic/AlterFunction.h
src/model/effects/generic/AlterPredicate.cpp
src/model/effects/generic/AlterPredicate.h
src/model/effects/generic/BetweennessFunction.cpp
src/model/effects/generic/BetweennessFunction.h
src/model/effects/generic/ConditionalFunction.cpp
src/model/effects/generic/ConditionalFunction.h
src/model/effects/generic/ConstantFunction.cpp
src/model/effects/generic/ConstantFunction.h
src/model/effects/generic/CovariateDegreeFunction.cpp
src/model/effects/generic/CovariateDegreeFunction.h
src/model/effects/generic/CovariateDistance2AlterNetworkFunction.cpp
src/model/effects/generic/CovariateDistance2AlterNetworkFunction.h
src/model/effects/generic/CovariateDistance2EgoAltSimNetworkFunction.cpp
src/model/effects/generic/CovariateDistance2EgoAltSimNetworkFunction.h
src/model/effects/generic/CovariateDistance2InAlterNetworkFunction.cpp
src/model/effects/generic/CovariateDistance2InAlterNetworkFunction.h
src/model/effects/generic/CovariateDistance2NetworkFunction.cpp
src/model/effects/generic/CovariateDistance2NetworkFunction.h
src/model/effects/generic/CovariateDistance2SimilarityNetworkFunction.cpp
src/model/effects/generic/CovariateDistance2SimilarityNetworkFunction.h
src/model/effects/generic/CovariateMixedNetworkAlterFunction.cpp
src/model/effects/generic/CovariateMixedNetworkAlterFunction.h
src/model/effects/generic/CovariateNetworkAlterFunction.cpp
src/model/effects/generic/CovariateNetworkAlterFunction.h
src/model/effects/generic/CovariatePredicate.cpp
src/model/effects/generic/CovariatePredicate.h
src/model/effects/generic/DifferenceFunction.cpp
src/model/effects/generic/DifferenceFunction.h
src/model/effects/generic/DifferentCovariateInStarFunction.cpp
src/model/effects/generic/DifferentCovariateInStarFunction.h
src/model/effects/generic/DifferentCovariateOutStarFunction.cpp
src/model/effects/generic/DifferentCovariateOutStarFunction.h
src/model/effects/generic/DoubleOutActFunction.cpp
src/model/effects/generic/DoubleOutActFunction.h
src/model/effects/generic/EgoInDegreeFunction.cpp
src/model/effects/generic/EgoInDegreeFunction.h
src/model/effects/generic/EgoOutDegreeFunction.cpp
src/model/effects/generic/EgoOutDegreeFunction.h
src/model/effects/generic/EqualCovariatePredicate.cpp
src/model/effects/generic/EqualCovariatePredicate.h
src/model/effects/generic/GenericNetworkEffect.cpp
src/model/effects/generic/GenericNetworkEffect.h
src/model/effects/generic/GwespFunction.cpp
src/model/effects/generic/GwespFunction.h
src/model/effects/generic/HomCovariateMixedTwoPathFunction.cpp
src/model/effects/generic/HomCovariateMixedTwoPathFunction.h
src/model/effects/generic/InDegreeFunction.cpp
src/model/effects/generic/InDegreeFunction.h
src/model/effects/generic/InJaccardFunction.cpp
src/model/effects/generic/InJaccardFunction.h
src/model/effects/generic/InStarFunction.cpp
src/model/effects/generic/InStarFunction.h
src/model/effects/generic/InStarsTimesDegreesFunction.cpp
src/model/effects/generic/InStarsTimesDegreesFunction.h
src/model/effects/generic/InTieFunction.cpp
src/model/effects/generic/InTieFunction.h
src/model/effects/generic/IntAlterFunction.cpp
src/model/effects/generic/IntAlterFunction.h
src/model/effects/generic/IntSqrtFunction.cpp
src/model/effects/generic/IntSqrtFunction.h
src/model/effects/generic/MissingCovariatePredicate.cpp
src/model/effects/generic/MissingCovariatePredicate.h
src/model/effects/generic/MixedInStarFunction.cpp
src/model/effects/generic/MixedInStarFunction.h
src/model/effects/generic/MixedNetworkAlterFunction.cpp
src/model/effects/generic/MixedNetworkAlterFunction.h
src/model/effects/generic/MixedOutStarFunction.cpp
src/model/effects/generic/MixedOutStarFunction.h
src/model/effects/generic/MixedThreeCyclesFunction.cpp
src/model/effects/generic/MixedThreeCyclesFunction.h
src/model/effects/generic/MixedTwoPathFunction.cpp
src/model/effects/generic/MixedTwoPathFunction.h
src/model/effects/generic/NetworkAlterFunction.cpp
src/model/effects/generic/NetworkAlterFunction.h
src/model/effects/generic/OneModeNetworkAlterFunction.cpp
src/model/effects/generic/OneModeNetworkAlterFunction.h
src/model/effects/generic/OutActDistance2Function.cpp
src/model/effects/generic/OutActDistance2Function.h
src/model/effects/generic/OutDegreeFunction.cpp
src/model/effects/generic/OutDegreeFunction.h
src/model/effects/generic/OutJaccardFunction.cpp
src/model/effects/generic/OutJaccardFunction.h
src/model/effects/generic/OutStarFunction.cpp
src/model/effects/generic/OutStarFunction.h
src/model/effects/generic/OutTieFunction.cpp
src/model/effects/generic/OutTieFunction.h
src/model/effects/generic/ProductFunction.cpp
src/model/effects/generic/ProductFunction.h
src/model/effects/generic/ReciprocatedTwoPathFunction.cpp
src/model/effects/generic/ReciprocatedTwoPathFunction.h
src/model/effects/generic/ReverseTwoPathFunction.cpp
src/model/effects/generic/ReverseTwoPathFunction.h
src/model/effects/generic/SameCovariateInStarFunction.cpp
src/model/effects/generic/SameCovariateInStarFunction.h
src/model/effects/generic/SameCovariateInTiesFunction.cpp
src/model/effects/generic/SameCovariateInTiesFunction.h
src/model/effects/generic/SameCovariateMixedTwoPathFunction.cpp
src/model/effects/generic/SameCovariateMixedTwoPathFunction.h
src/model/effects/generic/SameCovariateOutStarFunction.cpp
src/model/effects/generic/SameCovariateOutStarFunction.h
src/model/effects/generic/SameCovariateTwoPathFunction.cpp
src/model/effects/generic/SameCovariateTwoPathFunction.h
src/model/effects/generic/SumFunction.cpp
src/model/effects/generic/SumFunction.h
src/model/effects/generic/TwoPathFunction.cpp
src/model/effects/generic/TwoPathFunction.h
src/model/filters
src/model/filters/AtLeastOneFilter.cpp
src/model/filters/AtLeastOneFilter.h
src/model/filters/DisjointFilter.cpp
src/model/filters/DisjointFilter.h
src/model/filters/HigherFilter.cpp
src/model/filters/HigherFilter.h
src/model/filters/LowerFilter.cpp
src/model/filters/LowerFilter.h
src/model/filters/NetworkDependentFilter.cpp
src/model/filters/NetworkDependentFilter.h
src/model/filters/PermittedChangeFilter.cpp
src/model/filters/PermittedChangeFilter.h
src/model/ml
src/model/ml/BehaviorChange.cpp
src/model/ml/BehaviorChange.h
src/model/ml/Chain.cpp
src/model/ml/Chain.h
src/model/ml/MLSimulation.cpp
src/model/ml/MLSimulation.h
src/model/ml/MiniStep.cpp
src/model/ml/MiniStep.h
src/model/ml/NetworkChange.cpp
src/model/ml/NetworkChange.h
src/model/ml/Option.cpp
src/model/ml/Option.h
src/model/tables
src/model/tables/BetweennessTable.cpp
src/model/tables/BetweennessTable.h
src/model/tables/Cache.cpp
src/model/tables/Cache.h
src/model/tables/ConfigurationTable.cpp
src/model/tables/ConfigurationTable.h
src/model/tables/CriticalInStarTable.cpp
src/model/tables/CriticalInStarTable.h
src/model/tables/EgocentricConfigurationTable.cpp
src/model/tables/EgocentricConfigurationTable.h
src/model/tables/MixedConfigurationTable.cpp
src/model/tables/MixedConfigurationTable.h
src/model/tables/MixedEgocentricConfigurationTable.cpp
src/model/tables/MixedEgocentricConfigurationTable.h
src/model/tables/MixedTwoPathTable.cpp
src/model/tables/MixedTwoPathTable.h
src/model/tables/NetworkCache.cpp
src/model/tables/NetworkCache.h
src/model/tables/TwoNetworkCache.cpp
src/model/tables/TwoNetworkCache.h
src/model/tables/TwoPathTable.cpp
src/model/tables/TwoPathTable.h
src/model/variables
src/model/variables/BehaviorVariable.cpp
src/model/variables/BehaviorVariable.h
src/model/variables/DependentVariable.cpp
src/model/variables/DependentVariable.h
src/model/variables/DiffusionEffectValueTable.cpp
src/model/variables/DiffusionEffectValueTable.h
src/model/variables/EffectValueTable.cpp
src/model/variables/EffectValueTable.h
src/model/variables/NetworkVariable.cpp
src/model/variables/NetworkVariable.h
src/network
src/network/CommonNeighborIterator.cpp
src/network/CommonNeighborIterator.h
src/network/INetworkChangeListener.h
src/network/IncidentTieIterator.cpp
src/network/IncidentTieIterator.h
src/network/Network.cpp
src/network/Network.h
src/network/NetworkUtils.cpp
src/network/NetworkUtils.h
src/network/OneModeNetwork.cpp
src/network/OneModeNetwork.h
src/network/TieIterator.cpp
src/network/TieIterator.h
src/network/iterators
src/network/iterators/CombinedTieIterator.cpp
src/network/iterators/CombinedTieIterator.h
src/network/iterators/ITieIterator.h
src/network/iterators/IntersectionTieIterator.cpp
src/network/iterators/IntersectionTieIterator.h
src/network/iterators/SymDiffTieIterator.cpp
src/network/iterators/SymDiffTieIterator.h
src/network/iterators/UnionTieIterator.cpp
src/network/iterators/UnionTieIterator.h
src/network/layers
src/network/layers/DistanceTwoLayer.cpp
src/network/layers/DistanceTwoLayer.h
src/network/layers/NetworkLayer.h
src/siena07internals.cpp
src/siena07internals.h
src/siena07models.cpp
src/siena07models.h
src/siena07setup.cpp
src/siena07setup.h
src/siena07utilities.cpp
src/siena07utilities.h
src/sources.list
src/utils
src/utils/NamedObject.cpp
src/utils/NamedObject.h
src/utils/Random.cpp
src/utils/Random.h
src/utils/SqrtTable.cpp
src/utils/SqrtTable.h
src/utils/Utils.cpp
src/utils/Utils.h
tests
tests/parallel.R
tests/parallel.Rout.save
tests/s50-network1.dat
tests/s50-network2.dat
tests/s50-network3.dat
tests/s50.csv
tests/s50_d1.net
tests/s50_d2.net
tests/s50_d3.net
tests/s50e.csv
tests/s50e.dat
tests/s50paj.csv

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