Description Usage Arguments Value Examples
View source: R/GatherSynonyms.R
This function goes through the hierarchy pages to collect taxonomic synonyms.
1 | GatherSynonyms(MyHiers, output = c("detail", "counts"))
|
MyHiers |
A vector of filenames for downloaded hierarchy pages |
output |
Detail will return a data frame with each taxon and their taxonomic synonyms; counts will return a dataframe with each species and synonym counts. |
When output is set to detail, it returns a data frame where each row is the taxonomic unit that has a synonym, the hierarchy ID, and the synonym. When output="counts", each taxon is included whether it has a synonym or not. Rather than report the synonyms, it reports the number of synonyms for each.
1 2 3 | data(MyHiers)
GatherSynonyms(MyHiers, output="detail")
GatherSynonyms(MyHiers, "c")
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