hapmap_geno: SNP genotypes of HapMap samples

In SNPRelate: Parallel Computing Toolset for Genome-Wide Association Studies (GWAS)

Description

A list object including the following components:

sample.id – a vector of sample ids;

snp.id – a vector of SNP ids;

snp.position – a vector of SNP positions;

snp.chromosome – a vector of chromosome indices;

snp.allele – a character vector of “reference / non-reference”;

genotype – a “# of SNPs” X “# of samples” genotype matrix.

Usage

hapmap_geno

SNPRelate documentation built on May 2, 2019, 4:56 p.m.