Spike Train Analysis with R

acf.spikeTrain | Auto- Covariance and -Correlation Function Estimation for... |

as.repeatedTrain | Coerce and Test repeatedTrain Objects |

as.spikeTrain | Coerce, Test and Extract from spikeTrain Objects |

brt4df | Get Backward Recurrence Times from Data Frames Generated by... |

cockroachALData | Spike Trains of several Cockroach Antennal Lobe Neurons... |

coef.durationFit | Utility Functions for durationFit Objects |

compModels | Compare Duration Models on a Specific Data Set |

df4counts | Generates a Data Frame from a repeatedTrain Object After Time... |

diff.spikeTrain | diff method for spikeTrain objects |

dinvgauss | The Inverse Gaussian Distribution |

dllogis | The Log Logistic Distribution |

drexp | The Refractory Exponential Distribution |

frt | Computes Forward Recurrence Times from Two transformedTrain... |

gammaMLE | Maximum Likelihood Parameter Estimation of a Gamma Model with... |

gamObj | Generic Function and Methods for Extracting a gamObject |

hgamma | Hazard Functions for Some Common Duration Distributions |

hist.lockedTrain | Auto- and Cross-Intensity Function Estimate for Spike Trains |

invgaussMLE | Maximum Likelihood Parameter Estimation of an Inverse... |

isiHistFit | ISI Histogram With Fitted Model and CI |

jpsth | Related Functions and Methods for Joint-PSTHs and Joint... |

llogisMLE | Maximum Likelihood Parameter Estimation of a Log Logistic... |

lnormMLE | Maximum Likelihood Parameter Estimation of a Log Normal Model... |

lockedTrain | Construct and Plot Time-Dependent Cross-correlation Diagram |

mkDummy | Generates a Data Frame of Dummy Variables for Use in gam |

mkGLMdf | Formats (lists of) spikeTrain and repeatedTrain Objects into... |

mkREdf | Evaluates RateEvolutions for spikeTrain Lists and Returns... |

plot.frt | Plots and Summarizes frt Objects. |

plot.spikeTrain | Display Counting Process Associated with Single Spike Train |

plot.transformedTrain | Plot Diagnostics for an transformedTrain Object |

print.repeatedTrain | Print and Summary Methods for repeatedTrain Objects |

print.spikeTrain | Print and Summary Methods for spikeTrain Objects |

psth | Compute and Plot Peri-Stimulus Time Histogram |

purkinjeCellData | Spike Trains of a Purkinje Cells (PC) Recorded in Control... |

qqDuration | Quantile-Quantile Plot For Fitted Duration Distributions |

raster | Generate a Raster Plot |

rateEvolution | Evaluates and Plots a Spike Train Firing Rate's Evolution |

renewalTestPlot | Non-Parametric Tests for Renewal Processes |

reportHTML | Generic Function for Automatic HTML Report Generation |

reportHTML.gam | Generates a Report in HTML Format from a STAR gam Object |

reportHTML.repeatedTrain | Performs Basic Spike Train Analysis and Generates a Report in... |

reportHTML.spikeTrain | Performs Basic Spike Train Analysis and Generates a Report in... |

rexpMLE | Maximum Likelihood Parameter Estimation of a Refractory... |

ShallowShocks | Shallow Shocks (M >= 6.0) in OFF Tohoku Area for 1885-1980 |

slockedTrain | Function to Smooth a lockedTrain Object and Related Methods |

spsth | Smooth Peri Stimulus Time Histogram Related Functions and... |

STAR-package | Spike Train Analysis with R |

summary.transformedTrain | Summary of transformedTrain Objects |

trainWAV | Generate wav Files from Spike Train(s) |

transformedTrain | Performs Time Transformation of Spike Trains Fitted with glm... |

varianceTime | Variance-Time Analysis for Spike Trains |

weibullMLE | Maximum Likelihood Parameter Estimation of a Weibull Model... |

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