getref: Download reference gene annotation

Description Usage Arguments Details Value Author(s) See Also Examples

View source: R/ann.R

Description

To download reference gene table from UCSC genome browser golden path.

Usage

1
getref(ref="hg19")

Arguments

ref

The version of reference genome, such as hg18, hg19, etc.

Details

List of reference gene table can be found at: http://hgdownload.cse.ucsc.edu/goldenPath/.

Value

A data.frame from flat table of reference gene annotation.

Author(s)

Qiang Hu

See Also

Pos2Gene

Examples

1
#gereq(varRes1)

VPA documentation built on May 21, 2017, 12:27 a.m.

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