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tests/06-testCycle.R
In WayFindR: Computing Graph Structures on WikiPathways
library(WayFindR)
xmlfile <- system.file("pathways/WP3850.gpml", package = "WayFindR")
gr <- GPMLtoIgraph(xmlfile)
cyc <- findCycles(gr)
cyc
lapply(cyc, interpretCycle, graph = gr)
S <- WayFindR:::cycleSubgraph(gr, cyc)
#set.seed(13579)
#L <- igraph::layout_with_graphopt(G)
#plot(G, layout=L)
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WayFindR documentation built on July 17, 2024, 3 p.m.
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library(WayFindR)
xmlfile <- system.file("pathways/WP3850.gpml", package = "WayFindR")
gr <- GPMLtoIgraph(xmlfile)
cyc <- findCycles(gr)
cyc
lapply(cyc, interpretCycle, graph = gr)
S <- WayFindR:::cycleSubgraph(gr, cyc)
#set.seed(13579)
#L <- igraph::layout_with_graphopt(G)
#plot(G, layout=L)
Try the WayFindR package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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