fitConnectivity: Estimate connectivity of an ARF model

Description Usage Arguments Details Value Author(s) See Also

Description

fitConnectivity estimates the functional connectivity between activated regions in an ARF model based on trial-to-trial amplitude variation. It uses the single-trial data (extracted from the raw time-series using makeSingleTrialEvents), to estimate the trial-by-trial amplitudes of each region in the ARF model.

Usage

1
fitConnectivity(arfmodel, funcfilename="single_events.nii.gz")

Arguments

arfmodel

An ARF model object (class model)

funcfilename

Filename of the volume containing the single-trial data.

Details

Each volume of the file specified in funcfilename should contain estimates of a single-trial (see makeSingleTrialEvents).

Value

Returns an object of class arfcorrelation including the region by time matrix of amplitude time-series and the estimated correlations.

Author(s)

Wouter D. Weeda - w.d.weeda@gmail.com

See Also

model, makeSingleTrialEvents, arfcorrelation, roiConnectivity


arf3DS4 documentation built on May 2, 2019, 5:16 p.m.