getModelAtlas: Get Atlas Labels for an ARF model.

In arf3DS4: Activated Region Fitting, fMRI data analysis (3D).

Description

getModelAtlas fetches atlas labels for the center coordinates of all regions in a model.

Usage

getModelAtlas(arfmodel, regrun = 1, saveastext = F)

Arguments

arfmodel	Object of class "model" (see model).
regrun	Which run is used for the coordinate conversion?
saveastext	Save a text file in the working directory with atlas information?

Details

getModelAtlas only works with a working copy of a full FSL installation (>=4.1). It calls getAtlasLabels.

Value

Returns a list of length nrow(coordinates) with a talairach and/or a harvard slot containing the labels.

Author(s)

Wouter D. Weeda - [e-mail]

References

See http://www.fmrib.ox.ac.uk/fsl/ on how to obtain FSL and licences. See http://www.fmrib.ox.ac.uk/fsl/data/atlas-descriptions.html on information on the atlases.

See Also

model, getAtlasLabels

arf3DS4 documentation built on May 2, 2019, 5:16 p.m.