diveMove: Dive analysis and calibration

Utilities to represent, visualize, filter, analyse, and summarize time-depth recorder (TDR) data. Miscellaneous functions for handling location data are also provided.

AuthorSebastian P. Luque <spluque@gmail.com>
Date of publication2014-02-20 18:52:51
MaintainerSebastian P. Luque <spluque@gmail.com>
LicenseGPL-3
Version1.3.9
http://r-forge.r-project.org/projects/divemove

View on R-Forge

Man pages

austFilter: Filter satellite locations

bout-methods: Methods for Plotting and Extracting the Bout Ending Criterion

bout-misc: Fit a Broken Stick Model on Log Frequency Data for...

bouts2MLE: Maximum Likelihood Model of mixture of 2 Poisson Processes

bouts2NLS: Fit mixture of 2 Poisson Processes to Log Frequency data

bouts3NLS: Fit mixture of 3 Poisson Processes to Log Frequency data

calibrateDepth: Calibrate Depth and Generate a "TDRcalibrate" object

calibrateSpeed: Calibrate and build a "TDRcalibrate" object

detDive-internal: Detect dives from depth readings

detPhase-internal: Detect phases of activity from depth readings

distSpeed: Calculate distance and speed between locations

diveModel-class: Class "diveModel" for representing a model for identifying...

diveMove-internal: Internal diveMove Functions

diveMove-package: Dive Analysis and Calibration

dives: Sample of TDR data from a fur seal

diveStats: Per-dive statistics

extractDive-methods: Extract Dives from "TDR" or "TDRcalibrate" Objects

labDive-internal: Internal Functions used for Detection of Dives

plotDiveModel-methods: Methods for plotting models of dive phases

plotTDR-methods: Methods for plotting objects of class "TDR" and...

plotZOC-methods: Methods for visually assessing results of ZOC procedure

readLocs: Read comma-delimited file with location data

readTDR: Read comma-delimited file with "TDR" data

rqPlot: Plot of quantile regression for speed calibrations

sealLocs: Ringed and Gray Seal ARGOS Satellite Location Data

TDR-accessors: Coerce, Extractor, and Replacement methods for class "TDR"...

TDRcalibrate-accessors: Methods to Show and Extract Basic Information from...

TDRcalibrate-class: Class "TDRcalibrate" for dive analysis

TDR-class: Classes "TDR" and "TDRspeed" for representing TDR information

timeBudget-methods: Describe the Time Budget of Major Activities from...

Files in this package

diveMove/.Rinstignore
diveMove/ChangeLog
diveMove/DESCRIPTION
diveMove/NAMESPACE
diveMove/NEWS
diveMove/R
diveMove/R/AllClass.R diveMove/R/AllGenerics.R diveMove/R/AllMethod.R diveMove/R/austFilter.R diveMove/R/bouts.R diveMove/R/calibrate.R diveMove/R/detDive.R diveMove/R/detPhase.R diveMove/R/distSpeed.R diveMove/R/diveStats.R diveMove/R/oneDiveStats.R diveMove/R/plotTDR.R diveMove/R/plotZOC.R diveMove/R/readLocs.R diveMove/R/readTDR.R diveMove/R/speedStats.R diveMove/R/stampDive.R diveMove/R/zoc.R diveMove/R/zzz.R
diveMove/README
diveMove/build
diveMove/build/vignette.rds
diveMove/data
diveMove/data/dives.csv
diveMove/data/divesTDR.RData
diveMove/data/sealLocs.csv
diveMove/inst
diveMove/inst/CITATION
diveMove/inst/doc
diveMove/inst/doc/diveMove.R
diveMove/inst/doc/diveMove.Rnw
diveMove/inst/doc/diveMove.pdf
diveMove/man
diveMove/man/TDR-accessors.Rd diveMove/man/TDR-class.Rd diveMove/man/TDRcalibrate-accessors.Rd diveMove/man/TDRcalibrate-class.Rd diveMove/man/austFilter.Rd diveMove/man/bout-methods.Rd diveMove/man/bout-misc.Rd diveMove/man/bouts2MLE.Rd diveMove/man/bouts2NLS.Rd diveMove/man/bouts3NLS.Rd diveMove/man/calibrateDepth.Rd diveMove/man/calibrateSpeed.Rd diveMove/man/detDive-internal.Rd diveMove/man/detPhase-internal.Rd diveMove/man/distSpeed.Rd diveMove/man/diveModel-class.Rd diveMove/man/diveMove-internal.Rd diveMove/man/diveMove-package.Rd diveMove/man/diveStats.Rd diveMove/man/dives.Rd diveMove/man/extractDive-methods.Rd diveMove/man/labDive-internal.Rd diveMove/man/plotDiveModel-methods.Rd diveMove/man/plotTDR-methods.Rd diveMove/man/plotZOC-methods.Rd diveMove/man/readLocs.Rd diveMove/man/readTDR.Rd diveMove/man/rqPlot.Rd diveMove/man/sealLocs.Rd diveMove/man/timeBudget-methods.Rd
diveMove/tests
diveMove/tests/calibrations.R
diveMove/tests/class-tests.R
diveMove/tests/final-stats.R
diveMove/vignettes
diveMove/vignettes/Makefile
diveMove/vignettes/biblioSPL.bib
diveMove/vignettes/diveMove.Rnw
diveMove/vignettes/tcltk.png

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.