Comparison of 4 Bartonella genomes by BLAST.
barto, a list of three dataframes, representing the four genomes
and their pairwise comparisons:
dna_segswhich is a list of 4
objects, containing all the protein genes for each genome. Obtained
by reading ptt files downloaded from NCBI with
comparisonswhich is a list of 3
objects, obtained by doing genome-to-genome (fasta files) BLASTS,
and then reading the resulting tab files with
rnt_segswhich is a list of 4
containing all the RNA genes of the four genomes. Obtained by
reading rnt files downloaded from NCBI with
A bash script to obtain the same file as in the dataset is
available in the
extdata folder of the package. Find its
location by running
system.file('extdata/barto.sh', package = 'genoPlotR').
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