sim.inference.model: Simulate a Sample of Genes

In infeR: A pedagogical tool to teach the basics of inference in population genetics

Description

Simulate a sample of genes.

Usage

  sim.inference.model(number.of.sampled.demes,sample.sizes,M,pi)

Arguments

number.of.sampled.demes	number of demes sampled
sample.sizes	number of genes sampled in each deme
M	twice the product of effective size of each deme and migration rate
pi	vector of allele A frequencies at each locus from the migrant pool

Details

Simulate a sample of genes, using a diffusion approximation for the probability of gene counts within each deme.

Value

a ‘sample’ object

Examples

## This is to simulate a sample of genes.

sample <- sim.inference.model(number.of.sampled.demes = 10,sample.sizes = 50,M = 2,pi = runif(2))
sample

infeR documentation built on May 2, 2019, 4:45 p.m.