anc.est.naive: Naive ancestral allele frequency estimates

In nicholsonppp: Evolution simulation and classification

Description

Estimate ancestral allele frequencies by simply taking the mean of all the current observations. This is a simple statistic we can use to reality check the model estimates, and which are fast enough to calculate for each generation in the simulation, facilitating animations.

Usage

anc.est.naive(fr)

Arguments

fr	Subset of simulation data frame containing the generation of interest from which we estimate the ancestral frequency.

Value

Data frame with a row for each locus, summarizing naive ancestral allele frequencies in the ancestral.est column.

Author(s)

Toby Dylan Hocking <[e-mail]>

nicholsonppp documentation built on May 2, 2019, 5:55 p.m.