classify | Wrapper to run all classifiers for one run |
confusionMatrix | compute a confusion matrix for the optimal number of features... |
inTrainingSample | Function to define a learning sample based on balanced... |
limmaTwoGroups | Wrapper around limma for the comparison of two groups |
mcrPlot | Misclassification Rate Plot |
nlcv | Nested Loop Cross-Validation |
nlcvData | Simulated Datasets to Demonstrate nlcv Functionality |
nldaI | new MLInterfaces schema for lda from MASS |
pamrI | Instance of a learnerSchema for pamr models |
pamrML | Wrapper function around the pamr.* functions |
pamrTrain | Function providing a formula interface to pamr.train |
rankDistributionPlot | Plot the Distribution of Ranks of Features Across nlcv Runs |
rocPlot | Produce a ROC plot for a classification model belonging to a... |
scoresPlot | Function to Plot a Scores Plot |
topTable-methods | Methods for topTable |
xtable.confusionMatrix | xtable method for confusionMatrix objects |
xtable.summary.mcrPlot | xtable method for summary.mcrPlot objects |
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