Description Usage Arguments Details Value Author(s) References
Wrapper around limma for the comparison of two groups
1 | limmaTwoGroups(object, group)
|
object |
object of class ExpressionSet |
group |
string indicating the variable defining the two groups to be compared |
Basically, the wrapper combines the lmFit
, eBayes
and topTable
steps
topTable
output for the second (i.e. slope) coefficient
of the linear model.
Tobias Verbeke
Smyth, G. K. (2004). Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Statistical Applications in Genetics and Molecular Biology, Vol. 3, No. 1, Article 3.
http://www.bepress.com/sagmb/vol3/iss1/art3
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.