patchwork: Allele-specific Copy Number Analysis of whole genome data

Performs a allele-specific copy number analysis of whole genome data.

AuthorMarkus Mayrhofer, Sebastian DiLorenzo
Date of publication2017-02-03 12:39:12
MaintainerMarkus Mayrhofer <Markus.Mayrhofer@medsci.uu.se>
LicenseGPL-2
Version2.4

View on R-Forge

Functions

alleledata Man page
applyref Man page
assignAI Man page
check Man page
chromsCN Man page
chrom_ucsc Man page
copynumbers Man page
createreference Man page
deChrom_ucsc Man page
GCNorm Man page
help.patchwork Man page
is.autosome Man page
karyotype Man page
karyotype_check Man page
karyotype_chroms Man page
karyotype_chromsCN Man page
Medians_n_AI Man page
patchwork Man page
patchwork.alleledata Man page
patchwork.applyref Man page
patchwork.copynumbers Man page
patchwork.createreference Man page
patchwork.GCNorm Man page
patchwork.help Man page
patchwork.Medians_n_AI Man page
patchwork.plot Man page
patchwork.readChroms Man page
patchwork.readme Man page
patchwork.region Man page
Patchwork.Region Man page
patchwork.segment Man page
patchwork.smoothing Man page
patchwork.subfunctions_copynumbers Man page
readChroms Man page
readme.patchwork Man page
region Man page
smoothing Man page
subfunctions_copynumbers Man page
weightedMean Man page
weightedMedian Man page

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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