patchwork.smoothing: patchwork smoothing function

Description Usage Arguments Author(s) See Also

View source: R/patchwork.smoothing.r

Description

Applies smoothing by averaging kb segments.

Usage

1
patchwork.smoothing(data,normaldata=NULL,reference=NULL,chroms)

Arguments

data

data object generated after patchwork.GCNorm().

normaldata

Default is NULL, generated and used if you have supplied normal.bam to patchwork.plot.

reference

Default is NULL, used if you have supplied reference argument to patchwork.plot.

chroms

chroms is an object generated from pile.alleles.RData's alf\$achr attribute.

Author(s)

Markus Mayrhofer, [email protected] Sebastian DiLorenzo, [email protected]

See Also

patchwork.plot


patchwork documentation built on May 31, 2017, 2:54 a.m.