karyotype | karyotype plotting function |
karyotype_check | Karyotype check function |
karyotype_chroms | Karyotype plotting of each chromosome |
karyotype_chromsCN | Karyotype plotting for each chromosome post... |
patchwork.alleledata | patchwork alleledata function |
patchwork.applyref | Apply reference to query data |
patchwork.copynumbers | Function plot allele-specific copy numbers of the genome |
patchwork.createreference | Patchwork function to create your own normal reference file. |
patchwork.GCNorm | patchwork GC normalizing function |
patchwork.Medians_n_AI | patchwork function which computes medians and allelec... |
patchwork.plot | Patchwork main function |
patchwork.readChroms | patchwork function to read chromosomes into R |
patchwork.region | Detailed view of a selected regions of the genome. |
patchwork.segment | patchwork segmentation function |
patchwork.smoothing | patchwork smoothing function |
subfunctions_copynumbers | A number of subfunctions used within patchwork.copynumbers(). |
zzz | Welcome to patchwork |
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