Description Usage Arguments Value Author(s) References See Also Examples
Import tables (e.g. life history data) to an active rangeMapper
project.
1 2 3 |
con |
An sqlite connection pointing to a valid |
loc |
file location or |
tableName |
if missing, the name of the file or data.frame is used |
... |
Arguments to pass to the corresponding methods: e.g. the ID, the column corresponding to the names of the range files |
A ‘BIO’ table is created in the corresponding rangeMapper
project.
Mihai Valcu valcu@orn.mpg.de
Valcu, M., Dale, J. and Kempenaers, B. (2012) rangeMapper: A platform for the study of macroecology of life history traits. 21(9). (DOI: 10.1111/j.1466-8238.2011.00739.x)
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 | require(rangeMapper)
wd = setwd(tempdir())
r = readOGR(system.file(package = "rangeMapper",
"extdata", "wrens", "vector_combined"), "wrens", verbose = FALSE)
dbcon = rangeMap.start(file = "wrens.sqlite", overwrite = TRUE,
dir = tempdir() )
global.bbox.save(con = dbcon, bbox = r)
gridSize.save(dbcon, gridSize = 2)
canvas.save(dbcon)
processRanges(spdf = r, con = dbcon, ID = "sci_name" )
# Upload BIO tables
data(wrens)
Troglodytes = wrens[grep("Troglodytes", wrens$sci_name), c(2, 5)]
bio.save(con = dbcon, loc = Troglodytes, ID = "sci_name")
#wrensPath = system.file(package = "rangeMapper", "data", "wrens.csv")
#bio.save(con = dbcon, loc = wrensPath, ID = "sci_name")
#bio.merge(dbcon, "wrensNew")
#metadata2bio(dbcon)
summary(rangeMap("wrens.sqlite"))$BIO_tables
setwd(wd)
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