calculate.cluster.size.moments.from.tree: Calculate cluster size moments from tree
In rcolgem: statistical inference and modeling of genealogies generated by epidemic and ecological processes
Description
Calculate cluster moments of the distribution of cluster sizes (clade sizes), which change as a function of the threhold TMRCA used for defining clades. Currently, only sampling at a single time point is supported.
Usage
1
calculate.cluster.size.moments.from.tree(bdt, heights)
Arguments
bdt
a binary dated tree object
heights
vector numeric, heights at which to
calculate cluster sizes
rcolgem documentation built on May 2, 2019, 5:28 p.m.
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Description
Calculate cluster moments of the distribution of cluster sizes (clade sizes), which change as a function of the threhold TMRCA used for defining clades. Currently, only sampling at a single time point is supported.
Usage
1 | calculate.cluster.size.moments.from.tree(bdt, heights)
|
Arguments
bdt |
a binary dated tree object |
heights |
vector numeric, heights at which to calculate cluster sizes |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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